RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
SOX6-217ENST00000533870 PSMB7Q99436 277 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 AGPAT1Q99943 283 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 INTS2Q9H0H0 1204 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 EPC1Q9H2F5 836 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 TSPYL2Q9H2G4 693 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 LRRC19Q9H756 370 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 HDAC6Q9UBN7 1215 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 DRG1Q9Y295 367 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 PCDHB2Q9Y5E7 798 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 PCDHA1Q9Y5I3 950 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 ALG6Q9Y672 507 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 TNS3Q68CZ2 1445 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CCDC162PA2VCL2 907 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 GAS7O60861 476 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CLASP2O75122 1294 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 KRT14P02533 472 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 PRR29P0C7W0 189 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CCDC130P13994 396 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 LTKP29376 864 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 HSPA1LP34931 641 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 PPARGP37231 505 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 KCNMA1Q12791 1236 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 MARK2Q7KZI7 788 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 APTXQ7Z2E3 356 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 SH2D3CQ8N5H7 860 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 B4GALNT2Q8NHY0 566 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CCDC124Q96CT7 223 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 VPS39Q96JC1 886 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 PUS3Q9BZE2 481 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CNOT8Q9UFF9 292 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 GRIN2DO15399 1336 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 FRMD3A2A2Y4 597 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 MTSS1O43312 755 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 RTN3O95197 1032 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 GJB6O95452 261 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 GFAPP14136 432 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 PGM1P36871 562 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 COILP38432 576 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 HADHAP40939 763 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 ZNF135P52742 658 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 LAMB3Q13751 1172 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 MORF4L2Q15014 288 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 TXNRD1Q16881 649 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 FAM133BQ5BKY9 247 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 C12orf60Q5U649 245 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 DUPD1Q68J44 220 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 DRICH1Q6PGQ1 229 aaPredicted RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 ZC3H18Q86VM9 953 aaKnown RBP4.3□□□□□ -1.72
SOX6-217ENST00000533870 RELL1Q8IUW5 271 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 GRAMD1CQ8IYS0 662 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 TMEM47Q9BQJ4 181 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 KLC2Q9H0B6 622 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 KCNK4Q9NYG8 393 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 APEX2Q9UBZ4 518 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 DNAJC5BQ9UF47 199 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 IP6K2Q9UHH9 426 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 SOX13Q9UN79 622 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 KIAA1024Q9UPX6 916 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CDY2AQ9Y6F7 541 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CDY1Q9Y6F8 540 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 SMIM23A6NLE4 172 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 PHF20L1A8MW92 1017 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 MATN2O00339 956 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 FOXN1O15353 648 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 CYP27B1O15528 508 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 ECE2O60344 883 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 MTA2O94776 668 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 COG7P83436 770 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 MECOMQ03112 1051 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
SOX6-217ENST00000533870 ARCQ7LC44 396 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 KRT27Q7Z3Y8 459 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 LRRC43Q8N309 656 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 NBPF15Q8N660 670 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 FBXL13Q8NEE6 735 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 TNIP2Q8NFZ5 429 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 RSAD2Q8WXG1 361 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 SDCCAG3Q96C92 435 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 HES6Q96HZ4 224 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 AMACRQ9UHK6 382 aa4.3□□□□□ -1.72
SOX6-217ENST00000533870 AFF2P51816 1311 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 MCF2LO15068 1137 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 MED7O43513 233 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 NMT2O60551 498 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 KLHL41O60662 606 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ZMYND10O75800 440 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PENKP01210 267 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 GLI1P08151 1106 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 MAGEA8P43361 318 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 SERPINB10P48595 397 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 CDK7P50613 346 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 NLRP11P59045 1033 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 CHRNDQ07001 517 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PTK6Q13882 451 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 KYAT1Q16773 422 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 IZUMO3Q5VZ72 239 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 RINT1Q6NUQ1 792 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms