RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SPDL1Q96EA4 605 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 ZSWIM1Q9BR11 485 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 GPRC5CQ9NQ84 441 aa20.77■□□□□ 0.92
CAPN1-226ENST00000533820 DLATP10515 647 aaKnown RBP20.76■□□□□ 0.91
CAPN1-226ENST00000533820 GPC5P78333 572 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 SEL1L2Q5TEA6 688 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 NOP9Q86U38 636 aaKnown RBP20.76■□□□□ 0.91
CAPN1-226ENST00000533820 DDX23Q9BUQ8 820 aaKnown RBP20.76■□□□□ 0.91
CAPN1-226ENST00000533820 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 TRIM37O94972 964 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 CREB1P16220 341 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 GBP2P32456 591 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-226ENST00000533820 KIF22Q14807 665 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 GMCL1P1Q8NEA9 526 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 PLEKHO2Q8TD55 490 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 PRMT6Q96LA8 375 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-226ENST00000533820 FAM118BQ9BPY3 351 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 ADAM7Q9H2U9 754 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 CCDC169A6NNP5 214 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 PPP1R7Q15435 360 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 RHOT2Q8IXI1 618 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 CCDC197Q8NCU1 140 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 TRPC6Q9Y210 931 aa20.76■□□□□ 0.91
CAPN1-226ENST00000533820 CYP3A4P08684 503 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 DHX34Q14147 1143 aaKnown RBP20.75■□□□□ 0.91
CAPN1-226ENST00000533820 DAB2IPQ5VWQ8 1189 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 SAAL1Q96ER3 474 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 NUP85Q9BW27 656 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 SCAF8Q9UPN6 1271 aaKnown RBP20.75■□□□□ 0.91
CAPN1-226ENST00000533820 FAM187AA6NFU0 413 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 CLDN3O15551 220 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 RARAP10276 462 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 HIBCHQ6NVY1 386 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-226ENST00000533820 PARP9Q8IXQ6 854 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 DYDC1Q8WWB3 177 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 ATG4AQ8WYN0 398 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 SLC5A5Q92911 643 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 TBC1D31Q96DN5 1066 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 PWWP2AQ96N64 755 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 KIFC3Q9BVG8 833 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 CNOT10Q9H9A5 744 aaKnown RBP20.75■□□□□ 0.91
CAPN1-226ENST00000533820 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.75■□□□□ 0.91
CAPN1-226ENST00000533820 MTRF1LQ9UGC7 380 aaKnown RBP20.75■□□□□ 0.91
CAPN1-226ENST00000533820 SYNGAP1Q96PV0 1343 aa20.75■□□□□ 0.91
CAPN1-226ENST00000533820 PAEPP09466 180 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 PPP2R5CQ13362 524 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 SLC15A2Q16348 729 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 ANKRD42Q8N9B4 389 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 CCT6BQ92526 530 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 DHX38Q92620 1227 aaKnown RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 ZNF653Q96CK0 615 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 ACTR5Q9H9F9 607 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 G3BP2Q9UN86 482 aaKnown RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 STK24Q9Y6E0 443 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 RASGRF2O14827 1237 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 SLC16A4O15374 487 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 ECE2O60344 883 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 CETN1Q12798 172 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 SEPT12Q8IYM1 358 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 TCP11Q8WWU5 503 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 HOMER2Q9NSB8 354 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 TPX2Q9ULW0 747 aaKnown RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 CHRNA3P32297 505 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 MIGA2Q7L4E1 593 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 ZNF317Q96PQ6 595 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 TOPORSQ9NS56 1045 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-226ENST00000533820 CTNNAL1Q9UBT7 734 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 BAIAP2L1Q9UHR4 511 aa20.74■□□□□ 0.91
CAPN1-226ENST00000533820 C5orf60A6NFR6 353 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 ZNF131P52739 623 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 SNCBQ16143 134 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 LLGL2Q6P1M3 1020 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 MIER3Q7Z3K6 550 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 ZNF564Q8TBZ8 553 aaPredicted RBP20.73■□□□□ 0.91
CAPN1-226ENST00000533820 ATXN2LQ8WWM7 1075 aaKnown RBP20.73■□□□□ 0.91
CAPN1-226ENST00000533820 TEKT3Q9BXF9 490 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 WDR11Q9BZH6 1224 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 TRIM7Q9C029 511 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 GGA2Q9UJY4 613 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 DIS3Q9Y2L1 958 aaKnown RBP20.73■□□□□ 0.91
CAPN1-226ENST00000533820 SRRM3A6NNA2 597 aaPredicted RBP20.73■□□□□ 0.91
CAPN1-226ENST00000533820 NUDT17P0C025 328 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 CHRNB2P17787 502 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 MXI1P50539 228 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 DACT2Q5SW24 774 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 CDAN1Q8IWY9 1227 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 EPS8L1Q8TE68 723 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 HSPBP1Q9NZL4 362 aa20.73■□□□□ 0.91
CAPN1-226ENST00000533820 CLTAP09496 248 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 NPR1P16066 1061 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 PEX3P56589 373 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 RWDD2BP57060 319 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 TBC1D1Q86TI0 1168 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 FAM228AQ86W67 206 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 CBWD2Q8IUF1 395 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 IDI2Q9BXS1 227 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 GLIS2Q9BZE0 524 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SEL1LQ9UBV2 794 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 ASIC3Q9UHC3 531 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms