RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ZFYVE26Q68DK2 2539 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 MSH4O15457 936 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 CHMP2AO43633 222 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 GDF9O60383 454 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 CIITAP33076 1130 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 PSEN1P49768 467 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 SETQ01105 290 aaPredicted RBP13.81□□□□□ -0.2
SVIP-205ENST00000533774 MTAPQ13126 283 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 DIEXFQ68CQ4 756 aaKnown RBP13.81□□□□□ -0.2
SVIP-205ENST00000533774 APOA5Q6Q788 366 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 ZNF410Q86VK4 478 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 ZNF687Q8N1G0 1237 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 ITFG1Q8TB96 612 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 FGF13Q92913 245 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 NLRP4Q96MN2 994 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 MBOAT7Q96N66 472 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
SVIP-205ENST00000533774 DPP7Q9UHL4 492 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 TCEAL9Q9UHQ7 104 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 SSX2IPQ9Y2D8 614 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 CEP295Q9C0D2 2601 aa13.81□□□□□ -0.2
SVIP-205ENST00000533774 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.8□□□□□ -0.2
SVIP-205ENST00000533774 CDC27P30260 824 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 ZBTB41Q5SVQ8 909 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 ELMSAN1Q6PJG2 1045 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 TPRG1Q6ZUI0 275 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 NETO1Q8TDF5 533 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 RABGGTAQ92696 567 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 ZFP42Q96MM3 310 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 GAD1Q99259 594 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 PLA2G2FQ9BZM2 168 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 INO80BQ9C086 356 aaPredicted RBP13.8□□□□□ -0.2
SVIP-205ENST00000533774 FNIP2Q9P278 1114 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 GMEB2Q9UKD1 530 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 ZFP37Q9Y6Q3 630 aaPredicted RBP13.8□□□□□ -0.2
SVIP-205ENST00000533774 CNTNAP2Q9UHC6 1331 aa13.8□□□□□ -0.2
SVIP-205ENST00000533774 ARL5CA6NH57 179 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 SLC27A2O14975 620 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 C1RP00736 705 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 MAGEA9P43362 315 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 RPS9P46781 194 aaKnown RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 SCNN1GP51170 649 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 CDC42EP1Q00587 391 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 PRSS55Q6UWB4 352 aaPredicted RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 RSPO2Q6UXX9 243 aaPredicted RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 SLC5A5Q92911 643 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
SVIP-205ENST00000533774 GLT8D2Q9H1C3 349 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 FBXW11Q9UKB1 542 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 HES2Q9Y543 173 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 SPEGQ15772 3267 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 ASPMQ8IZT6 3477 aa13.79□□□□□ -0.2
SVIP-205ENST00000533774 CCL16O15467 120 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 PMLP29590 882 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 MLH1P40692 756 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 DNM2P50570 870 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 RTN1Q16799 776 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 XKR3Q5GH77 459 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 PLA2G4FQ68DD2 849 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 B3GNT9Q6UX72 402 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 ANO5Q75V66 913 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
SVIP-205ENST00000533774 ZMYND12Q9H0C1 365 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 HEBP1Q9NRV9 189 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 RBM28Q9NW13 759 aaKnown RBP13.78□□□□□ -0.2
SVIP-205ENST00000533774 HCFC1R1Q9NWW0 138 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 IPPQ9Y573 584 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 EML5Q05BV3 1969 aa13.78□□□□□ -0.2
SVIP-205ENST00000533774 ESYT2A0FGR8 921 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 NRG2O14511 850 aaPredicted RBP13.77□□□□□ -0.21
SVIP-205ENST00000533774 ADAM12O43184 909 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 GAS7O60861 476 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 PSMD10O75832 226 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 ITGA4P13612 1032 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 PFKFB3Q16875 520 aaPredicted RBP13.77□□□□□ -0.21
SVIP-205ENST00000533774 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 N4BP2L1Q5TBK1 243 aaPredicted RBP13.77□□□□□ -0.21
SVIP-205ENST00000533774 LAIR1Q6GTX8 287 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 MTSS1LQ765P7 747 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 NPAS3Q8IXF0 933 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 GSTCDQ8NEC7 633 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 RIT2Q99578 217 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 CLSTN3Q9BQT9 956 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 PHF20Q9BVI0 1012 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 SEMA4GQ9NTN9 838 aa13.77□□□□□ -0.21
SVIP-205ENST00000533774 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms