RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 IRX4P78413 519 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 CDK17Q00537 523 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 RAG1P15918 1043 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 ZNF18P17022 549 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 PXMP2Q9NR77 195 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 CDC23Q9UJX2 597 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 ZC3H4Q9UPT8 1303 aaKnown RBP12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 CCDC151A5D8V7 595 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 PRRG1O14668 218 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 SEC31AO94979 1220 aaKnown RBP12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 UPP2O95045 317 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 VGLL4Q14135 290 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 PANX2Q96RD6 677 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 XPNPEP3Q9NQH7 507 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 WDR35Q9P2L0 1181 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 AGAP1Q9UPQ3 857 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 ZWINTO95229 277 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 ASPHQ12797 758 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 IFT88Q13099 833 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 KRT31Q15323 416 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 KIAA1755Q5JYT7 1200 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 ALKBH5Q6P6C2 394 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 EEF2KMTQ96G04 330 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 BPIFA3Q9BQP9 254 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 MAF1Q9H063 256 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 INTS2Q9H0H0 1204 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 FRMD4AQ9P2Q2 1039 aaPredicted RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 FAN1Q9Y2M0 1017 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 IFT172Q9UG01 1749 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 SGK1O00141 431 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 EFHC2Q5JST6 749 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 MMS22LQ6ZRQ5 1243 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 ARHGAP18Q8N392 663 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 MORC4Q8TE76 937 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 PDCD2LQ9BRP1 358 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 MKNK1Q9BUB5 465 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 RIOX1Q9H6W3 641 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 GJB4Q9NTQ9 266 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 KANSL3Q9P2N6 904 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 ATP11BQ9Y2G3 1177 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 ATRNO75882 1429 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 OPHN1O60890 802 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 GNA15P30679 374 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 MAGEA9P43362 315 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 PRMT2P55345 433 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 SAAL1Q96ER3 474 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12□□□□□ -0.49
AMBRA1-211ENST00000533727 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
AMBRA1-211ENST00000533727 NLRP11P59045 1033 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 PSMD6Q15008 389 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 RWDD4Q6NW29 188 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 DNAAF3Q8N9W5 541 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 SYTL5Q8TDW5 730 aaPredicted RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 P2RX7Q99572 595 aaKnown RBP12□□□□□ -0.49
AMBRA1-211ENST00000533727 TRIM9Q9C026 710 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 VCX3AQ9NNX9 186 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 HSPBP1Q9NZL4 362 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 MRC1P22897 1456 aa12□□□□□ -0.49
AMBRA1-211ENST00000533727 CA12O43570 354 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ZBED1O96006 694 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 KRT7P08729 469 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 GUCY1A2P33402 732 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 DRP2Q13474 957 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MAP3K21Q5TCX8 1036 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 CNPY4Q8N129 248 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 FAM8A1Q9UBU6 413 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 BCAP29Q9UHQ4 241 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 FBXO2Q9UK22 296 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MYO5BQ9ULV0 1848 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ZMYM2Q9UBW7 1377 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 PGRMC1O00264 195 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 P4HA2O15460 535 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 SFSWAPQ12872 951 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 DHX38Q92620 1227 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 N4BP2L2Q92802 583 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MAGOHBQ96A72 148 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 PPP1R13BQ96KQ4 1090 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 DYRK4Q9NR20 520 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 FAF1Q9UNN5 650 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ZFXP17010 805 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ADORA2AP29274 412 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 EIF4A3P38919 411 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 NAMPTP43490 491 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ACADSBP45954 432 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 OR1G1P47890 313 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 RWDD2BP57060 319 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 EHHADHQ08426 723 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 CCDC15Q0P6D6 951 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 THOC5Q13769 683 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 RAB44Q7Z6P3 723 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 VSTM4Q8IW00 320 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms