RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 TRAIPQ9BWF2 469 aa18.9■□□□□ 0.62
CTSB-229ENST00000533572 MRPL9Q9BYD2 267 aaKnown RBP18.9■□□□□ 0.62
CTSB-229ENST00000533572 TMEM134Q9H6X4 195 aa18.9■□□□□ 0.62
CTSB-229ENST00000533572 TYW1Q9NV66 732 aaKnown RBP18.9■□□□□ 0.62
CTSB-229ENST00000533572 PCDHB13Q9Y5F0 798 aa18.9■□□□□ 0.62
CTSB-229ENST00000533572 FNDC1Q4ZHG4 1894 aaPredicted RBP18.89■□□□□ 0.61
CTSB-229ENST00000533572 SFI1A8K8P3 1242 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 RHOBTB3O94955 611 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
CTSB-229ENST00000533572 LINC00271P0C7V0 271 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 PRR29P0C7W0 189 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 NCKAP1LP55160 1127 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 EHHADHQ08426 723 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 FAM26FQ5R3K3 315 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 NT5DC1Q5TFE4 455 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 NOTUMQ6P988 496 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 ZNF598Q86UK7 904 aaKnown RBP18.89■□□□□ 0.61
CTSB-229ENST00000533572 SFR1Q86XK3 245 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 THNSL1Q8IYQ7 743 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 TRIML1Q8N9V2 468 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 HELQQ8TDG4 1101 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 CCDC51Q96ER9 411 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 MRPL44Q9H9J2 332 aaKnown RBP18.89■□□□□ 0.61
CTSB-229ENST00000533572 KIAA1468Q9P260 1216 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 COG5Q9UP83 839 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 PCDHA5Q9Y5H7 936 aa18.89■□□□□ 0.61
CTSB-229ENST00000533572 GRM6O15303 877 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 KLRC4O43908 158 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 CSPG5O95196 566 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 PPP1R2P41236 205 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 MBTD1Q05BQ5 628 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 CAMK4Q16566 473 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 MAPK6Q16659 721 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 TMEM132AQ24JP5 1023 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 AAK1Q2M2I8 961 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 KMT5BQ4FZB7 885 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 KLHL23Q8NBE8 558 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 ATXN2LQ8WWM7 1075 aaKnown RBP18.88■□□□□ 0.61
CTSB-229ENST00000533572 BSNDQ8WZ55 320 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 PPP2R3CQ969Q6 453 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 PRIMPOLQ96LW4 560 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 CASD1Q96PB1 797 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 TRIM6Q9C030 488 aaPredicted RBP18.88■□□□□ 0.61
CTSB-229ENST00000533572 NSUN3Q9H649 340 aaKnown RBP18.88■□□□□ 0.61
CTSB-229ENST00000533572 ALG13Q9NP73 1137 aaKnown RBP18.88■□□□□ 0.61
CTSB-229ENST00000533572 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
CTSB-229ENST00000533572 ARHGAP28Q9P2N2 729 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 PCDHB2Q9Y5E7 798 aa18.88■□□□□ 0.61
CTSB-229ENST00000533572 PRUNE2Q8WUY3 3088 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 SPTBN5Q9NRC6 3674 aaKnown RBP18.87■□□□□ 0.61
CTSB-229ENST00000533572 K7ENM7 598 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 K7ERI5 159 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 TSPAN1O60635 241 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 ZNF623O75123 536 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 UBE4BO95155 1302 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 ATF7P17544 494 aaPredicted RBP18.87■□□□□ 0.61
CTSB-229ENST00000533572 CASP1P29466 404 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 MRPS5P82675 430 aaKnown RBP18.87■□□□□ 0.61
CTSB-229ENST00000533572 STRN3Q13033 797 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 CLLU1OSQ5K130 101 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 ZNF720Q7Z2F6 126 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 HAUS6Q7Z4H7 955 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 HACE1Q8IYU2 909 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 COLGALT1Q8NBJ5 622 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 LPPQ93052 612 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 HLA-CQ95604 372 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 ZNF558Q96NG5 402 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 POLD4Q9HCU8 107 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 RNF19AQ9NV58 838 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 PLAGL2Q9UPG8 496 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 INPP5FQ9Y2H2 1132 aa18.87■□□□□ 0.61
CTSB-229ENST00000533572 KIAA1671Q9BY89 1806 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
CTSB-229ENST00000533572 SLC16A4O15374 487 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 ITGB1P05556 798 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 PPM1AP35813 382 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 GTF2BQ00403 316 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 RNASELQ05823 741 aaKnown RBP18.86■□□□□ 0.61
CTSB-229ENST00000533572 FAM187BQ17R55 369 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 RBM43Q6ZSC3 357 aaKnown RBP18.86■□□□□ 0.61
CTSB-229ENST00000533572 TMEM161BQ8NDZ6 487 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 URGCPQ8TCY9 931 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 CPB2Q96IY4 423 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 CWH43Q9H720 699 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 HCSTQ9UBK5 93 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 EXOC7Q9UPT5 735 aa18.86■□□□□ 0.61
CTSB-229ENST00000533572 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 CARNS1A5YM72 827 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 GCNT3O95395 438 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 ITGA4P13612 1032 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 HOXA11P31270 313 aaPredicted RBP18.85■□□□□ 0.61
CTSB-229ENST00000533572 UBE3AQ05086 875 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 TJAP1Q5JTD0 557 aa18.85■□□□□ 0.61
CTSB-229ENST00000533572 ZNF658Q5TYW1 1059 aaPredicted RBP18.85■□□□□ 0.61
CTSB-229ENST00000533572 POF1BQ8WVV4 589 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms