RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 RARS2Q5T160 578 aaKnown RBP13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 CDCA2Q69YH5 1023 aaPredicted RBP13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 C12orf76Q8N812 135 aaPredicted RBP13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 KLHL5Q96PQ7 755 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 FZD8Q9H461 694 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 NXF3Q9H4D5 531 aaKnown RBP13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 DPP7Q9UHL4 492 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
CAPRIN1-213ENST00000533562 C2CD2LO14523 706 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 ST18O60284 1047 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 CNPP09543 421 aaKnown RBP13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 NAMPTP43490 491 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 CLCN4P51793 760 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 SIGLEC14Q08ET2 396 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 PTGDRQ13258 359 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 RABEP1Q15276 862 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 MAPK6Q16659 721 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 PTPN21Q16825 1174 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 KIAA1841Q6NSI8 718 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 ELMSAN1Q6PJG2 1045 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 CDR2LQ86X02 465 aaPredicted RBP13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 C4orf32Q8N8J7 132 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 FBXL18Q96ME1 805 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 POMKQ9H5K3 350 aa13.72□□□□□ -0.21
CAPRIN1-213ENST00000533562 MYO10Q9HD67 2058 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 LAD1O00515 517 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 ACKR2O00590 384 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 N4BP3O15049 544 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 ADH1AP07327 375 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 EFNA5P52803 228 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 GRIK3Q13003 919 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 PRPF4BQ13523 1007 aaKnown RBP13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 TAS1R1Q7RTX1 841 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 KIFAP3Q92845 792 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 HERC2P3Q9BVR0 1158 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 SFXN1Q9H9B4 322 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 MARCH5Q9NX47 278 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 KIAA1024Q9UPX6 916 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 DNM3Q9UQ16 869 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 USTQ9Y2C2 406 aa13.71□□□□□ -0.21
CAPRIN1-213ENST00000533562 ZNF318Q5VUA4 2279 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 C2CD4DB7Z1M9 353 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 TADA2AO75478 443 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 PRKCBP05771 671 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 GLUD2P49448 558 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 TOB1P50616 345 aaPredicted RBP13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 DSG1Q02413 1049 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 NBR1Q14596 966 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 USP41Q3LFD5 358 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 KIAA0319Q5VV43 1072 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 KRT79Q5XKE5 535 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 KANK3Q6NY19 840 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 DTHD1Q6ZMT9 781 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 GPR149Q86SP6 731 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 SUGP1Q8IWZ8 645 aaKnown RBP13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 GPR65Q8IYL9 337 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 UBALD2Q8IYN6 164 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 ACSF2Q96CM8 615 aaPredicted RBP13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 CHST7Q9NS84 486 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 CDH22Q9UJ99 828 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
CAPRIN1-213ENST00000533562 TEX28O15482 410 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 EFEMP2O95967 443 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 C1RP00736 705 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 LIG1P18858 919 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 PRPHP41219 470 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 ECM1Q16610 540 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 MCTP1Q6DN14 999 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 ZDHHC14Q8IZN3 488 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 SNX29Q8TEQ0 813 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 BSNDQ8WZ55 320 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 PRRX2Q99811 253 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms