RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PGBD4Q96DM1 585 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 NXF3Q9H4D5 531 aaKnown RBP19.08■□□□□ 0.64
NXF1-216ENST00000533499 ZMYM2Q9UBW7 1377 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 A0A0U1RQF3 1178 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 GOLGA8IPA6NC78 632 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 GOLGA8JA6NMD2 632 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 PSMA7O14818 248 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 MCF2P10911 925 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 ATP2A2P16615 1042 aaKnown RBP19.07■□□□□ 0.64
NXF1-216ENST00000533499 AKAP5P24588 427 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 SAAL1Q96ER3 474 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 TSG101Q99816 390 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 CBWD1Q9BRT8 395 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
NXF1-216ENST00000533499 PTPRHQ9HD43 1115 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
NXF1-216ENST00000533499 SNTG2Q9NY99 539 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 AGO2Q9UKV8 859 aaKnown RBP19.07■□□□□ 0.64
NXF1-216ENST00000533499 CTNND2Q9UQB3 1225 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 INPP5FQ9Y2H2 1132 aa19.07■□□□□ 0.64
NXF1-216ENST00000533499 CALUO43852 315 aaPredicted RBP19.06■□□□□ 0.64
NXF1-216ENST00000533499 FGFR1P11362 822 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
NXF1-216ENST00000533499 BMP6P22004 513 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 GATMP50440 423 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 STX17P56962 302 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 NLRP12P59046 1061 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 FAM43BQ6ZT52 329 aaPredicted RBP19.06■□□□□ 0.64
NXF1-216ENST00000533499 NPAS4Q8IUM7 802 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 ABI1Q8IZP0 508 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 ADSSL1Q8N142 457 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 CEP120Q8N960 986 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 SMG8Q8ND04 991 aaKnown RBP19.06■□□□□ 0.64
NXF1-216ENST00000533499 KCNN1Q92952 543 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 FAM212AQ96EL1 285 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 SLC9A7Q96T83 725 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 HAPLN2Q9GZV7 340 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 GZF1Q9H116 711 aaPredicted RBP19.06■□□□□ 0.64
NXF1-216ENST00000533499 RNF39Q9H2S5 420 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 AGPAT3Q9NRZ7 376 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 TYW1Q9NV66 732 aaKnown RBP19.06■□□□□ 0.64
NXF1-216ENST00000533499 TMEM161AQ9NX61 479 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 KLK14Q9P0G3 267 aa19.06■□□□□ 0.64
NXF1-216ENST00000533499 TTC3P53804 2025 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 SYCE3A1L190 88 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 MEIS3P2A8K0S8 358 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 TGFB1I1O43294 461 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 PROZP22891 400 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 ACOT2P49753 483 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 YARSP54577 528 aaKnown RBP19.05■□□□□ 0.64
NXF1-216ENST00000533499 FAM189BP81408 668 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 MCL1Q07820 350 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 PAN2Q504Q3 1202 aaKnown RBP19.05■□□□□ 0.64
NXF1-216ENST00000533499 TDHQ8IZJ6 230 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 GOLGA5Q8TBA6 731 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 NELFBQ8WX92 580 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 FAM213AQ9BRX8 229 aa19.05■□□□□ 0.64
NXF1-216ENST00000533499 A0A0B4J269 797 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 GRXCR1A8MXD5 290 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 PPP1R3GB7ZBB8 358 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 PDXKO00764 312 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 ABLIM1O14639 778 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 OGTO15294 1046 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 ZNF623O75123 536 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 LETM1O95202 739 aaPredicted RBP19.04■□□□□ 0.64
NXF1-216ENST00000533499 EOMESO95936 686 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 ATF7P17544 494 aaPredicted RBP19.04■□□□□ 0.64
NXF1-216ENST00000533499 GARTP22102 1010 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 ADSSP30520 456 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 BMP8BP34820 402 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 PPP1R2P41236 205 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 DPCR1Q3MIW9 517 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 ZBTB41Q5SVQ8 909 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 RBM43Q6ZSC3 357 aaKnown RBP19.04■□□□□ 0.64
NXF1-216ENST00000533499 HERC6Q8IVU3 1022 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 TMEM192Q8IY95 271 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 MLKLQ8NB16 471 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 RDH13Q8NBN7 331 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 P2RX5Q93086 422 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 TOP1MTQ969P6 601 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 DHTKD1Q96HY7 919 aaPredicted RBP19.04■□□□□ 0.64
NXF1-216ENST00000533499 ACAP3Q96P50 834 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 YME1L1Q96TA2 773 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 TRAIPQ9BWF2 469 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 KCTD10Q9H3F6 313 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 SEMA6BQ9H3T3 888 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 RSAD1Q9HA92 442 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 RNF19AQ9NV58 838 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 HSPBP1Q9NZL4 362 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 DACH1Q9UI36 760 aa19.04■□□□□ 0.64
NXF1-216ENST00000533499 TRIM49BA6NDI0 452 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 TBKBP1A7MCY6 615 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 EXOC3O60645 756 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 RECQL4O94761 1208 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 NR3C1P04150 777 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 TNFSF9P41273 254 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 GRM5P41594 1212 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 RABGGTBP53611 331 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 PAK1Q13153 545 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms