RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 LTBRP36941 435 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 TXLNAP40222 546 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 AFF1P51825 1210 aaKnown RBP10.82□□□□□ -0.68
NUP98-220ENST00000533346 ERVFC1P60507 584 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 HYAL1Q12794 435 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 GRIK3Q13003 919 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 AXDND1Q5T1B0 1012 aaPredicted RBP10.82□□□□□ -0.68
NUP98-220ENST00000533346 ATF7IP2Q5U623 682 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 CNNM4Q6P4Q7 775 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 ALKAL1Q6UXT8 129 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 ZNF280BQ86YH2 543 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 EFHBQ8N7U6 833 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 GAD1Q99259 594 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 REEP2Q9BRK0 252 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 MRPL4Q9BYD3 311 aaKnown RBP10.82□□□□□ -0.68
NUP98-220ENST00000533346 CUEDC2Q9H467 287 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 NXF3Q9H4D5 531 aaKnown RBP10.82□□□□□ -0.68
NUP98-220ENST00000533346 MYO7AQ13402 2215 aa10.82□□□□□ -0.68
NUP98-220ENST00000533346 FRMD3A2A2Y4 597 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 CCDC169A6NNP5 214 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 SFI1A8K8P3 1242 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 NRP1O14786 923 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 TRAK2O60296 914 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 B4GALT3O60512 393 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 TOM1L1O75674 476 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 NPTXRO95502 500 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 CTSAP10619 480 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 MCF2P10911 925 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 GRM5P41594 1212 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 SLC11A1P49279 550 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 GTF2BQ00403 316 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 POU5F1Q01860 360 aaKnown RBP10.81□□□□□ -0.68
NUP98-220ENST00000533346 PKP1Q13835 747 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 MCM6Q14566 821 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 STK38Q15208 465 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 ZRSR1Q15695 479 aaKnown RBP10.81□□□□□ -0.68
NUP98-220ENST00000533346 NAB2Q15742 525 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 E2F4Q16254 413 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 DUSP6Q16828 381 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 RRAGBQ5VZM2 374 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 EEF1DP3Q658K8 133 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 GPBP1Q86WP2 473 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 MRPL43Q8N983 215 aaKnown RBP10.81□□□□□ -0.68
NUP98-220ENST00000533346 DNAJC19Q96DA6 116 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 TMEM169Q96HH4 297 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 PLIN2Q99541 437 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 KIFC3Q9BVG8 833 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 STRA6Q9BX79 667 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 ZBP1Q9H171 429 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 PARVGQ9HBI0 331 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 POLD4Q9HCU8 107 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 SEL1LQ9UBV2 794 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 DNAJB4Q9UDY4 337 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 FAN1Q9Y2M0 1017 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 ZDHHC9Q9Y397 364 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 HES2Q9Y543 173 aa10.81□□□□□ -0.68
NUP98-220ENST00000533346 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
NUP98-220ENST00000533346 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 TNFRSF10AO00220 468 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 PTGESO14684 152 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 SLC16A4O15374 487 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 LILRB3O75022 631 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 ZC3H11AO75152 810 aaKnown RBP eCLIP10.8□□□□□ -0.68
NUP98-220ENST00000533346 PPP1R37O75864 691 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 ADRB2P07550 413 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 MLH1P40692 756 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 CEBPZQ03701 1054 aaKnown RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 RNASELQ05823 741 aaKnown RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 MCL1Q07820 350 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 STRN3Q13033 797 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 COASYQ13057 564 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 SMC1AQ14683 1233 aaKnown RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 BMS1Q14692 1282 aaKnown RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 KYAT1Q16773 422 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 MPZL3Q6UWV2 235 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 SV2BQ7L1I2 683 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 HAUS6Q7Z4H7 955 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 ADGRD2Q7Z7M1 963 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 CDR2LQ86X02 465 aaPredicted RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 HVCN1Q96D96 273 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 FAM193BQ96PV7 902 aaPredicted RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 TSPAN18Q96SJ8 248 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 LRRC27Q9C0I9 530 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 CDT1Q9H211 546 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 TNMDQ9H2S6 317 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 OLFML3Q9NRN5 406 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 CHST7Q9NS84 486 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 KBTBD4Q9NVX7 518 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 MARCH5Q9NX47 278 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 SNTG2Q9NY99 539 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
NUP98-220ENST00000533346 SSX2IPQ9Y2D8 614 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 INPP5FQ9Y2H2 1132 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms