RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 RSPH3Q86UC2 560 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 TRIM59Q8IWR1 403 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 GOLGA5Q8TBA6 731 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 TTYH3Q9C0H2 523 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 SIP14410 1827 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 AKAP3O75969 853 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 CTSHP09668 335 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 TRIM21P19474 475 aaKnown RBP20.15■□□□□ 0.82
SMPD1-208ENST00000533123 FGFR4P22455 802 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 THPOP40225 353 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 CDK7P50613 346 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 CYP2J2P51589 502 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 MARSP56192 900 aaKnown RBP20.15■□□□□ 0.82
SMPD1-208ENST00000533123 TMEM40Q8WWA1 233 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 DHX38Q92620 1227 aaKnown RBP20.15■□□□□ 0.82
SMPD1-208ENST00000533123 TMEM106CQ9BVX2 250 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 GCOM2Q9BZD3 368 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-208ENST00000533123 AGPAT5Q9NUQ2 364 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 SIK3Q9Y2K2 1263 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 ACKR2O00590 384 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 EPHB6O15197 1021 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 RPL13P26373 211 aaKnown RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 CASP4P49662 377 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 PTK7Q13308 1070 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 CCDC51Q96ER9 411 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 DESI2Q9BSY9 194 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 MRPL4Q9BYD3 311 aaKnown RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 CAPN11Q9UMQ6 739 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 MRPS6P82932 125 aaKnown RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 PRPF4BQ13523 1007 aaKnown RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 RAD9BQ6WBX8 426 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 SRGAP1Q7Z6B7 1085 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 CELF4Q9BZC1 486 aaKnown RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 PRMT7Q9NVM4 692 aaPredicted RBP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.14■□□□□ 0.81
SMPD1-208ENST00000533123 CDY2AQ9Y6F7 541 aa20.14■□□□□ 0.81
SMPD1-208ENST00000533123 PIGRP01833 764 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 DARSP14868 501 aaKnown RBP20.13■□□□□ 0.81
SMPD1-208ENST00000533123 EIF4BP23588 611 aaKnown RBP20.13■□□□□ 0.81
SMPD1-208ENST00000533123 SNX17Q15036 470 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 AMHR2Q16671 573 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 NYAP1Q6ZVC0 841 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 ZSWIM2Q8NEG5 633 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 POMGNT1Q8WZA1 660 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 FAM207AQ9NSI2 230 aaPredicted RBP20.13■□□□□ 0.81
SMPD1-208ENST00000533123 DMAC2Q9NW81 257 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 CGNQ9P2M7 1197 aaKnown RBP20.13■□□□□ 0.81
SMPD1-208ENST00000533123 ANKFY1Q9P2R3 1169 aa20.13■□□□□ 0.81
SMPD1-208ENST00000533123 LUC7L2Q9Y383 392 aaKnown RBP20.13■□□□□ 0.81
SMPD1-208ENST00000533123 M0QZ92 97 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 CHRNA1P02708 482 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 CRYBB1P53674 252 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 SNRPFP62306 86 aaKnown RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 NFIL3Q16649 462 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 TMEM132AQ24JP5 1023 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 MTERF4Q7Z6M4 381 aaKnown RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 RPAINQ86UA6 219 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 CDR2LQ86X02 465 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 ACO2Q99798 780 aaKnown RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 HSPBP1Q9NZL4 362 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 TNNT1P13805 278 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 FECHP22830 423 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 FAM187BQ17R55 369 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 ZPBP2Q6X784 338 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 SLC39A5Q6ZMH5 540 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 SLC9A9Q8IVB4 645 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 FAM126BQ8IXS8 530 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 RDH13Q8NBN7 331 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 NAA15Q9BXJ9 866 aaKnown RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 HAPLN2Q9GZV7 340 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 ARMCX3Q9UH62 379 aaPredicted RBP20.12■□□□□ 0.81
SMPD1-208ENST00000533123 PPP2R2CQ9Y2T4 447 aa20.12■□□□□ 0.81
SMPD1-208ENST00000533123 EXOC3O60645 756 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 PQBP1O60828 265 aaKnown RBP20.11■□□□□ 0.81
SMPD1-208ENST00000533123 ERLIN2O94905 339 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 COL6A1P12109 1028 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 TRIM71Q2Q1W2 868 aaKnown RBP20.11■□□□□ 0.81
SMPD1-208ENST00000533123 C12orf56Q8IXR9 622 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 ZNF710Q8N1W2 664 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 SAAL1Q96ER3 474 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 CPB2Q96IY4 423 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 PAWRQ96IZ0 340 aaKnown RBP20.11■□□□□ 0.81
SMPD1-208ENST00000533123 TCHPQ9BT92 498 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 NUP58Q9BVL2 599 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 MMRN2Q9H8L6 949 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 TRPV2Q9Y5S1 764 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 GOLGA8IPA6NC78 632 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 GOLGA8JA6NMD2 632 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 MATR3P43243 847 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMPD1-208ENST00000533123 KCNMA1Q12791 1236 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 ATF7IP2Q5U623 682 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 FRMD5Q7Z6J6 570 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 ANKLE1Q8NAG6 615 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 OR8K1Q8NGG5 319 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 PRIMPOLQ96LW4 560 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 DNAJC7Q99615 494 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 STYXL1Q9Y6J8 313 aa20.11■□□□□ 0.81
SMPD1-208ENST00000533123 CLDN3O15551 220 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms