RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 B4GALT3O60512 393 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 NR1I2O75469 434 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 GLP2RO95838 553 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 PLA2G4BP0C869 781 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 SCNN1GP51170 649 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 SLC12A3P55017 1021 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 DSC1Q08554 894 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 GRIK3Q13003 919 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 COASYQ13057 564 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 COLGALT2Q8IYK4 626 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 BCL7CQ8WUZ0 217 aaPredicted RBP18.33■□□□□ 0.52
PKP3-209ENST00000533069 TMEM134Q9H6X4 195 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 KMT5AQ9NQR1 393 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 ARHGAP28Q9P2N2 729 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 PARP2Q9UGN5 583 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 MTMR6Q9Y217 621 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 IRAK3Q9Y616 596 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 BDP1A6H8Y1 2624 aa18.33■□□□□ 0.52
PKP3-209ENST00000533069 MUC3AQ02505 3323 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 TTLL13PA6NNM8 815 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 NRP1O14786 923 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 MBTPS2O43462 519 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 CTSAP10619 480 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 AKAP5P24588 427 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 PTPAQ15257 358 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 SMAD2Q15796 467 aaKnown RBP18.32■□□□□ 0.52
PKP3-209ENST00000533069 CLUL1Q15846 466 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 ATF7IP2Q5U623 682 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 TMEM184AQ6ZMB5 413 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 SMRP1Q8NCR6 262 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 RASSF8Q8NHQ8 419 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 SPIRE2Q8WWL2 714 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 RPS6KC1Q96S38 1066 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 PLIN2Q99541 437 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
PKP3-209ENST00000533069 CLIC4Q9Y696 253 aa18.32■□□□□ 0.52
PKP3-209ENST00000533069 MORC2Q9Y6X9 1032 aaPredicted RBP18.32■□□□□ 0.52
PKP3-209ENST00000533069 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.31■□□□□ 0.52
PKP3-209ENST00000533069 BRD1O95696 1058 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 CXCL14O95715 111 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 EDN1P05305 212 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 PLS3P13797 630 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 SMTNP53814 917 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 KCNC3Q14003 757 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 NT5DC1Q5TFE4 455 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 TMEM87AQ8NBN3 555 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 GSTCDQ8NEC7 633 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 VN1R2Q8NFZ6 395 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 NTPCRQ9BSD7 190 aaKnown RBP18.31■□□□□ 0.52
PKP3-209ENST00000533069 MRPL4Q9BYD3 311 aaKnown RBP18.31■□□□□ 0.52
PKP3-209ENST00000533069 TNFSF13BQ9Y275 285 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 BRWD1Q9NSI6 2320 aa18.31■□□□□ 0.52
PKP3-209ENST00000533069 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
PKP3-209ENST00000533069 CA8P35219 290 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 OR1G1P47890 313 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 GRIN1Q05586 938 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 EEF1DP3Q658K8 133 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 GJD3Q8N144 294 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 CASP10Q92851 521 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 POP1Q99575 1024 aaKnown RBP18.3■□□□□ 0.52
PKP3-209ENST00000533069 VN1R3Q9BXE9 311 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 CCSER1Q9C0I3 900 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 MIOSQ9NXC5 875 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 LARSQ9P2J5 1176 aaKnown RBP18.3■□□□□ 0.52
PKP3-209ENST00000533069 ODF2LQ9ULJ1 636 aa18.3■□□□□ 0.52
PKP3-209ENST00000533069 PRG3Q9Y2Y8 225 aaPredicted RBP18.3■□□□□ 0.52
PKP3-209ENST00000533069 H0YCG3 227 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 RECQL4O94761 1208 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 HOXB8P17481 243 aaPredicted RBP18.29■□□□□ 0.52
PKP3-209ENST00000533069 PLCG1P19174 1290 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 SCP2P22307 547 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 RAD51AP2Q09MP3 1159 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 STRN3Q13033 797 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 KARSQ15046 597 aaKnown RBP18.29■□□□□ 0.52
PKP3-209ENST00000533069 PTPN14Q15678 1187 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 GPBP1Q86WP2 473 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 ADHFE1Q8IWW8 467 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 RAD54LQ92698 747 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 ACO2Q99798 780 aaKnown RBP18.29■□□□□ 0.52
PKP3-209ENST00000533069 HERC2P3Q9BVR0 1158 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 COLEC11Q9BWP8 271 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 MARCH5Q9NX47 278 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 SNTG2Q9NY99 539 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 FBXO2Q9UK22 296 aaPredicted RBP18.29■□□□□ 0.52
PKP3-209ENST00000533069 SSX2IPQ9Y2D8 614 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 USP20Q9Y2K6 914 aa18.29■□□□□ 0.52
PKP3-209ENST00000533069 SRPRBQ9Y5M8 271 aaKnown RBP18.29■□□□□ 0.52
PKP3-209ENST00000533069 SFI1A8K8P3 1242 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 SLC16A4O15374 487 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
PKP3-209ENST00000533069 SOD2P04179 222 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 URODP06132 367 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 MARCKSP29966 332 aaPredicted RBP18.28■□□□□ 0.52
PKP3-209ENST00000533069 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
PKP3-209ENST00000533069 TXLNAP40222 546 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 ZP2Q05996 745 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 TUSC3Q13454 348 aa18.28■□□□□ 0.52
PKP3-209ENST00000533069 ARSHQ5FYA8 562 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms