RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 ATP6V0A4Q9HBG4 840 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 BMP2KQ9NSY1 1161 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 TBKBP1A7MCY6 615 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 HIDE1A8MVS5 230 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 HOXA2O43364 376 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 SYT1P21579 422 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 FGFR4P22455 802 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 FAM189BP81408 668 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 LAMTOR4Q0VGL1 99 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 IL17AQ16552 155 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 KRT79Q5XKE5 535 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 SRGAP1Q7Z6B7 1085 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 ELAC1Q9H777 363 aaKnown RBP11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 TMEM161AQ9NX61 479 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 DACT1Q9NYF0 836 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 FBXO4Q9UKT5 387 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 PLXNA4Q9HCM2 1894 aa11.29□□□□□ -0.6
CHMP4A-206ENST00000533011 TBC1D4O60343 1298 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 BMP15O95972 392 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 ARL2P36404 184 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 PHKA2P46019 1235 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 TFDP1Q14186 410 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 HSCBQ8IWL3 235 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 RNF149Q8NC42 400 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 SNX29Q8TEQ0 813 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 RIN2Q8WYP3 895 aaPredicted RBP11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 PCDHGA2Q9Y5H1 932 aa11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 FASNP49327 2511 aaKnown RBP11.28□□□□□ -0.6
CHMP4A-206ENST00000533011 A0A0U1RQF3 1178 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 ARHGEF35A5YM69 484 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 VWA3AA6NCI4 1184 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 PP2D1A8MPX8 630 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 CLASP2O75122 1294 aaKnown RBP11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 CDC25AP30304 524 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 PTENP60484 403 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 PCBP1Q15365 356 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 ECM1Q16610 540 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 FAM102BQ5T8I3 360 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 PADI6Q6TGC4 694 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 KCNT2Q6UVM3 1135 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 SHDQ96IW2 340 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 ZNF558Q96NG5 402 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 BHMT2Q9H2M3 363 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 CWH43Q9H720 699 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 DLGAP2Q9P1A6 1054 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 DNM3Q9UQ16 869 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 PIN4Q9Y237 131 aaKnown RBP11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 IRAK3Q9Y616 596 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.61
CHMP4A-206ENST00000533011 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 STX6O43752 255 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 HSP90AA1P07900 732 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 CYP11B2P19099 503 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 GLRA2P23416 452 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 GATMP50440 423 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 SF3A1Q15459 793 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 TWF2Q6IBS0 349 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 MAEAQ7L5Y9 396 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 GPR149Q86SP6 731 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 ECHDC2Q86YB7 292 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 NETO1Q8TDF5 533 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 ASAP3Q8TDY4 903 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 AK8Q96MA6 479 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 MMTAG2Q9BU76 263 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 NFKBIZQ9BYH8 718 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 TMEM117Q9H0C3 514 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 POLR3FQ9H1D9 316 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
CHMP4A-206ENST00000533011 TBC1D17Q9HA65 648 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms