RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	SHROOM2	Q13796	1616 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	ESYT3	A0FGR9	886 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	FBXW4	P57775	412 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	TEDDM1	Q5T9Z0	273 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	PNPLA7	Q6ZV29	1317 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791		H0Y3Z8	333 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	APOL1	O14791	398 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	TEX33	O43247	280 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	BRAF	P15056	766 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	GYS2	P54840	703 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	CDK17	Q00537	523 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	SEMA3F	Q13275	785 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	SGMS1	Q86VZ5	419 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	SLC26A7	Q8TE54	656 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	CENPK	Q9BS16	269 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	TRIM54	Q9BYV2	358 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	MAP3K20	Q9NYL2	800 aa	Known RBP	20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	PRKCB	P05771	671 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	CEP55	Q53EZ4	464 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	PDXDC1	Q6P996	788 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	ING2	Q9H160	280 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	NOP53	Q9NZM5	478 aa	Known RBP	20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	DCTN4	Q9UJW0	460 aa		20.71	■□□□□ 0.91
FGFR1-238	ENST00000532791	STAT5B	P51692	787 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	SMAD1	Q15797	465 aa	Known RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	NUDCD3	Q8IVD9	361 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	MYO1D	O94832	1006 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	GGPS1	O95749	300 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	TXN	P10599	105 aa	Known RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	PPP2R2A	P63151	447 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	IZUMO3	Q5VZ72	239 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	RNF135	Q8IUD6	432 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	C1orf54	Q8WWF1	131 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	RMDN1	Q96DB5	314 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	SLC13A1	Q9BZW2	595 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	RBBP7	Q16576	425 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	LMBRD2	Q68DH5	695 aa	Predicted RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	ARFIP2	P53365	341 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	DNAJC6	O75061	913 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	ZBTB17	Q13105	803 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	MTMR2	Q13614	643 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	ZC3H18	Q86VM9	953 aa	Known RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	OR6J1	Q8NGC5	347 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	PBXIP1	Q96AQ6	731 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	AGPAT1	Q99943	283 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	OSBPL5	Q9H0X9	879 aa	Predicted RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	TAF1D	Q9H5J8	278 aa	Predicted RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	PIN4	Q9Y237	131 aa	Known RBP	20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	ADGRG1	Q9Y653	693 aa		20.7	■□□□□ 0.9
FGFR1-238	ENST00000532791	SYCE1L	A8MT33	242 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	KIF28P	B7ZC32	967 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	FASTKD1	Q53R41	847 aa	Known RBP	20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	PID1	Q7Z2X4	250 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	TGS1	Q96RS0	853 aa	Known RBP	20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	TJP2	Q9UDY2	1190 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	PYGL	P06737	847 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	TYK2	P29597	1187 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	ATP6V1E1	P36543	226 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	FOXO4	P98177	505 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	CC2D1A	Q6P1N0	951 aa	Predicted RBP	20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	ABTB1	Q969K4	478 aa	Predicted RBP	20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	CASS4	Q9NQ75	786 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791		A0A1W2PQC6	194 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	NFIX	Q14938	502 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	SHC4	Q6S5L8	630 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	SH3TC2	Q8TF17	1288 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	DYRK4	Q9NR20	520 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	ADA2	Q9NZK5	511 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	HDAC6	Q9UBN7	1215 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	SYNDIG1L	A6NDD5	238 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	PDXK	O00764	312 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	NMT1	P30419	496 aa	Known RBP	20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	CACNB2	Q08289	660 aa	Predicted RBP	20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	C12orf60	Q5U649	245 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	RGS9BP	Q6ZS82	235 aa		20.69	■□□□□ 0.9
FGFR1-238	ENST00000532791	AARS	P49588	968 aa	Known RBP eCLIP	20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	ASPSCR1	Q9BZE9	553 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	PLEKHA5	Q9HAU0	1116 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	WARS2	Q9UGM6	360 aa	Known RBP	20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	HECW2	Q9P2P5	1572 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	CYP26A1	O43174	497 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	THEMIS2	Q5TEJ8	643 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	KIF17	Q9P2E2	1029 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	TNPO2	O14787	897 aa	Known RBP	20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	HSD17B4	P51659	736 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	LRRC37B	Q96QE4	947 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	ZNF189	O75820	626 aa	Predicted RBP	20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	GRIK1	P39086	918 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	MTBP	Q96DY7	904 aa		20.68	■□□□□ 0.9
FGFR1-238	ENST00000532791	KIAA0391	O15091	583 aa	Known RBP	20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	DDIAS	Q8IXT1	998 aa		20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	EPAS1	Q99814	870 aa		20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	ELP3	Q9H9T3	547 aa		20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	PRDM5	Q9NQX1	630 aa	Predicted RBP	20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	ARSE	P51690	589 aa		20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	PDIA5	Q14554	519 aa		20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	SPATA2L	Q8IUW3	424 aa	Predicted RBP	20.67	■□□□□ 0.9
FGFR1-238	ENST00000532791	DHX40	Q8IX18	779 aa	Known RBP	20.67	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms