RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ANKRD54Q6NXT1 300 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 CABP7Q86V35 215 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 AUTS2Q8WXX7 1259 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 CASP10Q92851 521 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 INTS4Q96HW7 963 aaKnown RBP18.99■□□□□ 0.63
PHRF1-204ENST00000532550 PNMA5Q96PV4 448 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 RPS6KC1Q96S38 1066 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 KIFC3Q9BVG8 833 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 RUSC1Q9BVN2 902 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 TIPINQ9BVW5 301 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 PDZD7Q9H5P4 517 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 EPHX3Q9H6B9 360 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 C17orf75Q9HAS0 396 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 KCNG1Q9UIX4 513 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 USP20Q9Y2K6 914 aa18.99■□□□□ 0.63
PHRF1-204ENST00000532550 PRG3Q9Y2Y8 225 aaPredicted RBP18.99■□□□□ 0.63
PHRF1-204ENST00000532550 TDRD15B5MCY1 1934 aaKnown RBP18.99■□□□□ 0.63
PHRF1-204ENST00000532550 HOXB8P17481 243 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-204ENST00000532550 NPTX2P47972 431 aa18.98■□□□□ 0.63
PHRF1-204ENST00000532550 DSC1Q08554 894 aa18.98■□□□□ 0.63
PHRF1-204ENST00000532550 SF3A1Q15459 793 aaKnown RBP18.98■□□□□ 0.63
PHRF1-204ENST00000532550 APBB1IPQ7Z5R6 666 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-204ENST00000532550 SYT2Q8N9I0 419 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-204ENST00000532550 CALML4Q96GE6 196 aa18.98■□□□□ 0.63
PHRF1-204ENST00000532550 KMT5AQ9NQR1 393 aa18.98■□□□□ 0.63
PHRF1-204ENST00000532550 SNTG2Q9NY99 539 aa18.98■□□□□ 0.63
PHRF1-204ENST00000532550 RBM19Q9Y4C8 960 aaKnown RBP18.98■□□□□ 0.63
PHRF1-204ENST00000532550 USP15Q9Y4E8 981 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-204ENST00000532550 C19orf67A6NJJ6 358 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 SFI1A8K8P3 1242 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 K7ELQ4 463 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-204ENST00000532550 SLC26A4O43511 780 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 PLA2G4BP0C869 781 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 SYT1P21579 422 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 GUCY2CP25092 1073 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 GRIK3Q13003 919 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 NT5DC1Q5TFE4 455 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 ATF7IP2Q5U623 682 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 DAW1Q8N136 415 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 GSTCDQ8NEC7 633 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 VN1R3Q9BXE9 311 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 EMILIN2Q9BXX0 1053 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 TMEM134Q9H6X4 195 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 MRPL17Q9NRX2 175 aaKnown RBP18.97■□□□□ 0.63
PHRF1-204ENST00000532550 SSX2IPQ9Y2D8 614 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 HCFC2Q9Y5Z7 792 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 PHLPP2Q6ZVD8 1323 aa18.97■□□□□ 0.63
PHRF1-204ENST00000532550 ZMYM2Q9UBW7 1377 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 PI4K2BG5E9Z4 385 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 SOD2P04179 222 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 EDN1P05305 212 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 LONP1P36776 959 aaKnown RBP18.96■□□□□ 0.63
PHRF1-204ENST00000532550 SMTNP53814 917 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 RAD51AP2Q09MP3 1159 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 DCAF4L1Q3SXM0 396 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 PPFIBP1Q86W92 1011 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 RASSF8Q8NHQ8 419 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 KHSRPQ92945 711 aaKnown RBP eCLIP18.96■□□□□ 0.63
PHRF1-204ENST00000532550 APOL5Q9BWW9 433 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 S1PR5Q9H228 398 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 KCND2Q9NZV8 630 aa18.96■□□□□ 0.63
PHRF1-204ENST00000532550 ALADP13716 330 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 KLRC2P26717 231 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 SLC12A3P55017 1021 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 PTPN14Q15678 1187 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 TMEM119Q4V9L6 283 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 EEF1DP3Q658K8 133 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 SYCE2Q6PIF2 218 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 NTPCRQ9BSD7 190 aaKnown RBP18.95■□□□□ 0.62
PHRF1-204ENST00000532550 MRPL4Q9BYD3 311 aaKnown RBP18.95■□□□□ 0.62
PHRF1-204ENST00000532550 MARCH5Q9NX47 278 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 TNFSF13BQ9Y275 285 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 GDAQ9Y2T3 454 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 C5orf42Q9H799 3197 aa18.95■□□□□ 0.62
PHRF1-204ENST00000532550 MYH11P35749 1972 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 SLC16A4O15374 487 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 TADA2AO75478 443 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 RECQL4O94761 1208 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 URODP06132 367 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 THP07101 528 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 MAPK7Q13164 816 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 KIAA1841Q6NSI8 718 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 CES5AQ6NT32 575 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 TAS1R1Q7RTX1 841 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 SPIRE2Q8WWL2 714 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 SUSD6Q92537 303 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 KLHL5Q96PQ7 755 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 ACO2Q99798 780 aaKnown RBP18.94■□□□□ 0.62
PHRF1-204ENST00000532550 TCHPQ9BT92 498 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 PHF7Q9BWX1 381 aaPredicted RBP18.94■□□□□ 0.62
PHRF1-204ENST00000532550 ARHGAP28Q9P2N2 729 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 CLIC4Q9Y696 253 aa18.94■□□□□ 0.62
PHRF1-204ENST00000532550 C2CD2LO14523 706 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 LILRB3O75022 631 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 PLS3P13797 630 aa18.93■□□□□ 0.62
PHRF1-204ENST00000532550 ITIH3Q06033 890 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms