RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 FAN1Q9Y2M0 1017 aa25.29■■□□□ 1.64
CAPN1-222ENST00000532285 H3BQ06 376 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-222ENST00000532285 NASPP49321 788 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-222ENST00000532285 SCNN1GP51170 649 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 SMTNP53814 917 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 DCAF4L1Q3SXM0 396 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 SPECC1Q5M775 1068 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 DDX53Q86TM3 631 aaKnown RBP25.28■■□□□ 1.64
CAPN1-222ENST00000532285 GPBP1Q86WP2 473 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-222ENST00000532285 LRRC15Q8TF66 581 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 ZNF396Q96N95 335 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-222ENST00000532285 CLIC6Q96NY7 704 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 CDCA3Q99618 268 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-222ENST00000532285 MIOSQ9NXC5 875 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 CCDC39Q9UFE4 941 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 ODF2LQ9ULJ1 636 aa25.28■■□□□ 1.64
CAPN1-222ENST00000532285 TRIP11Q15643 1979 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 NPHP3-ACAD11A0A0J9YXS1 232 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 SLC16A4O15374 487 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 ZSCAN22P10073 491 aaPredicted RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 TXLNAP40222 546 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 DHX8Q14562 1220 aaKnown RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 MCM6Q14566 821 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 SMC1AQ14683 1233 aaKnown RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 EEF1DP3Q658K8 133 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 USP49Q70CQ1 688 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 TMEM173Q86WV6 379 aaPredicted RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 KRI1Q8N9T8 703 aaKnown RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 UHRF1Q96T88 793 aaPredicted RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 MRPL4Q9BYD3 311 aaKnown RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 LARSQ9P2J5 1176 aaKnown RBP25.27■■□□□ 1.64
CAPN1-222ENST00000532285 STK39Q9UEW8 545 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 TNFSF13BQ9Y275 285 aa25.27■■□□□ 1.64
CAPN1-222ENST00000532285 NRP1O14786 923 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 LINC01565O15544 149 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 DDIT3P35638 169 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 DSC1Q08554 894 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 STK38Q15208 465 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 DUSP6Q16828 381 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 PTCRAQ6ISU1 281 aaPredicted RBP25.26■■□□□ 1.63
CAPN1-222ENST00000532285 TAS1R3Q7RTX0 852 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 COLGALT2Q8IYK4 626 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 VPS52Q8N1B4 723 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 SPRYD3Q8NCJ5 442 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 GSTCDQ8NEC7 633 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 LARP4BQ92615 738 aaKnown RBP25.26■■□□□ 1.63
CAPN1-222ENST00000532285 RPS6KC1Q96S38 1066 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 ACO2Q99798 780 aaKnown RBP25.26■■□□□ 1.63
CAPN1-222ENST00000532285 SNTG2Q9NY99 539 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 KLK14Q9P0G3 267 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 TTC28Q96AY4 2481 aa25.26■■□□□ 1.63
CAPN1-222ENST00000532285 HIDE1A8MVS5 230 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 PER2O15055 1255 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 NR1I2O75469 434 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 NDUFV1P49821 464 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 DLX2Q07687 328 aaPredicted RBP25.25■■□□□ 1.63
CAPN1-222ENST00000532285 GRIK3Q13003 919 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 MRPL43Q8N983 215 aaKnown RBP25.25■■□□□ 1.63
CAPN1-222ENST00000532285 LINC00301Q8NCQ3 95 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 TMEM161BQ8NDZ6 487 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 BCL7CQ8WUZ0 217 aaPredicted RBP25.25■■□□□ 1.63
CAPN1-222ENST00000532285 REEP2Q9BRK0 252 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 ZBP1Q9H171 429 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 STK17AQ9UEE5 414 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 FAM50BQ9Y247 325 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 NCOR1O75376 2440 aa25.25■■□□□ 1.63
CAPN1-222ENST00000532285 GRXCR2A6NFK2 248 aa25.24■■□□□ 1.63
CAPN1-222ENST00000532285 H0YCG3 227 aa25.24■■□□□ 1.63
CAPN1-222ENST00000532285 TBX10O75333 385 aa25.24■■□□□ 1.63
CAPN1-222ENST00000532285 CXCL14O95715 111 aa25.24■■□□□ 1.63
CAPN1-222ENST00000532285 KRT18P05783 430 aaKnown RBP25.24■■□□□ 1.63
CAPN1-222ENST00000532285 OR1G1P47890 313 aa25.24■■□□□ 1.63
CAPN1-222ENST00000532285 CACNB1Q02641 598 aaPredicted RBP25.24■■□□□ 1.63
CAPN1-222ENST00000532285 STRN3Q13033 797 aa25.24■■□□□ 1.63
CAPN1-222ENST00000532285 FOXD4L5Q5VV16 416 aaPredicted RBP25.24■■□□□ 1.63
CAPN1-222ENST00000532285 FOXD4L4Q8WXT5 416 aaPredicted RBP25.24■■□□□ 1.63
CAPN1-222ENST00000532285 TFIP11Q9UBB9 837 aaKnown RBP25.24■■□□□ 1.63
CAPN1-222ENST00000532285 C2orf71A6NGG8 1288 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 RECQL4O94761 1208 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 F13A1P00488 732 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 MAPTP10636 758 aaKnown RBP25.23■■□□□ 1.63
CAPN1-222ENST00000532285 GIT2Q14161 759 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 RRAGBQ5VZM2 374 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 TARS2Q9BW92 718 aaKnown RBP25.23■■□□□ 1.63
CAPN1-222ENST00000532285 PTPRHQ9HD43 1115 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 CITO14578 2027 aa25.23■■□□□ 1.63
CAPN1-222ENST00000532285 SPTLC2O15270 562 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 PPP6R2O75170 966 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 FAM13AO94988 1023 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 GLP2RO95838 553 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 CTSAP10619 480 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 SCP2P22307 547 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 ZNF131P52739 623 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 NCKAP1LP55160 1127 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 PARVGQ9HBI0 331 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 CD207Q9UJ71 328 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 GDAQ9Y2T3 454 aa25.22■■□□□ 1.63
CAPN1-222ENST00000532285 PRG3Q9Y2Y8 225 aaPredicted RBP25.22■■□□□ 1.63
CAPN1-222ENST00000532285 IRAK3Q9Y616 596 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms