RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ATP4AP20648 1035 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 TNFAIP3P21580 790 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 TMOD1P28289 359 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 HADHBP55084 474 aaKnown RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 GFPT1Q06210 699 aaPredicted RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 PCBP1Q15365 356 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHD7-211ENST00000532149 CCL15Q16663 113 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 GLE1Q53GS7 698 aaKnown RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 CDCA2Q69YH5 1023 aaPredicted RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 IQSEC1Q6DN90 963 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 ZNF687Q8N1G0 1237 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 IRX2Q9BZI1 471 aaPredicted RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 RAB20Q9NX57 234 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 LCMT1Q9UIC8 334 aa13.29□□□□□ -0.28
CHD7-211ENST00000532149 AGO2Q9UKV8 859 aaKnown RBP13.29□□□□□ -0.28
CHD7-211ENST00000532149 LRRC37A2A6NM11 1700 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 A0A087X0T9 212 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
CHD7-211ENST00000532149 SLC15A5A6NIM6 579 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 SOCS7O14512 581 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 EVI5O60447 810 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 TOM1L1O75674 476 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 PLEKP08567 350 aaPredicted RBP13.28□□□□□ -0.28
CHD7-211ENST00000532149 TMEM253P0C7T8 217 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 FAM228BP0C875 321 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 TBXAS1P24557 533 aaPredicted RBP13.28□□□□□ -0.28
CHD7-211ENST00000532149 ADSSP30520 456 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
CHD7-211ENST00000532149 PPP2R5EQ16537 467 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 MAPK6Q16659 721 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 ERCC6LQ2NKX8 1250 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 Q3C1V9 767 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 CFAP221Q4G0U5 840 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 CBWD6Q4V339 395 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 CBWD3Q5JTY5 395 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 CBWD5Q5RIA9 395 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 TMCO3Q6UWJ1 677 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
CHD7-211ENST00000532149 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 PPTC7Q8NI37 304 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 PBKQ96KB5 322 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 SELENOOQ9BVL4 669 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 PCIF1Q9H4Z3 704 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
CHD7-211ENST00000532149 A0A0B4J269 797 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 MACROD2A1Z1Q3 448 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 LRRIQ4A6NIV6 560 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 CLDN3O15551 220 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 ACTN1P12814 892 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 GLRA2P23416 452 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 ELF2Q15723 593 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 WDR93Q6P2C0 686 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 ARMCX2Q7L311 632 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 FAM71AQ8IYT1 594 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 RDH13Q8NBN7 331 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 CTNNBL1Q8WYA6 563 aaPredicted RBP13.27□□□□□ -0.29
CHD7-211ENST00000532149 TRIM11Q96F44 468 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 PCYT2Q99447 389 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 POLD4Q9HCU8 107 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 ARFGAP3Q9NP61 516 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.29
CHD7-211ENST00000532149 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 SIP14410 1827 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 ZNF236Q9UL36 1845 aa13.27□□□□□ -0.29
CHD7-211ENST00000532149 RCCD1A6NED2 376 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 FANCGO15287 622 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 TRIM49P0CI25 452 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 SP4Q02446 784 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 TNFAIP2Q03169 654 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 PPP3CAQ08209 521 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 GRB14Q14449 540 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 FAM187BQ17R55 369 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 LY6KQ17RY6 165 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 PLEKHH3Q7Z736 793 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 DPP9Q86TI2 863 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 KSR1Q8IVT5 923 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHD7-211ENST00000532149 BSNDQ8WZ55 320 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 SHC3Q92529 594 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 FGD4Q96M96 766 aa13.26□□□□□ -0.29
CHD7-211ENST00000532149 NAP1L3Q99457 506 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms