RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 PPP4R3AQ6IN85 833 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 SPATA31D4Q6ZUB0 917 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 MTSS1LQ765P7 747 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 TAS1R1Q7RTX1 841 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 BCO2Q9BYV7 579 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 NT5C3AQ9H0P0 336 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 MINDY3Q9H8M7 445 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 SLC2A4RGQ9NR83 387 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
CMTM1-215ENST00000531885 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.35
CMTM1-215ENST00000531885 EML1O00423 815 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 TBX3O15119 743 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 CCNT1O60563 726 aaKnown RBP12.85□□□□□ -0.35
CMTM1-215ENST00000531885 TSPAN1O60635 241 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 XYLBO75191 536 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 CDKL5O76039 1030 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 SP9P0CG40 484 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 SDHBP21912 280 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 HSPA4P34932 840 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 DSC1Q08554 894 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 GRIK3Q13003 919 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 NCAPH2Q6IBW4 605 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 CENPQQ7L2Z9 268 aaPredicted RBP12.85□□□□□ -0.35
CMTM1-215ENST00000531885 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 SMG8Q8ND04 991 aaKnown RBP12.85□□□□□ -0.35
CMTM1-215ENST00000531885 PJA1Q8NG27 643 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 KCNB2Q92953 911 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 ZNF707Q96C28 371 aaPredicted RBP12.85□□□□□ -0.35
CMTM1-215ENST00000531885 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 EIF2AQ9BY44 585 aaKnown RBP12.85□□□□□ -0.35
CMTM1-215ENST00000531885 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 ADAM28Q9UKQ2 775 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 VAV3Q9UKW4 847 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
CMTM1-215ENST00000531885 MTCL1Q9Y4B5 1905 aaKnown RBP12.85□□□□□ -0.35
CMTM1-215ENST00000531885 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 DOCK8Q8NF50 2099 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 LAMTOR5O43504 91 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 SLC37A4O43826 429 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 MAGEA9P43362 315 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 PTENP60484 403 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 PFKPQ01813 784 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 HTR4Q13639 388 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 PPM1LQ5SGD2 360 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 PDXDC1Q6P996 788 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
CMTM1-215ENST00000531885 GPR161Q8N6U8 529 aaKnown RBP12.84□□□□□ -0.35
CMTM1-215ENST00000531885 CPB2Q96IY4 423 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 KCNMB3Q9NPA1 279 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 PARP2Q9UGN5 583 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 POLIQ9UNA4 740 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 HES2Q9Y543 173 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
CMTM1-215ENST00000531885 ANHXE9PGG2 379 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 SPTLC1O15269 473 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 ZMYND10O75800 440 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 DGAT1O75907 488 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 EVCP57679 992 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 STARD6P59095 220 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 PRKCQQ04759 706 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 POU5F1BQ06416 359 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 ELAVL2Q12926 359 aaKnown RBP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 SLC27A1Q6PCB7 646 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 RUFY3Q7L099 469 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 TPH2Q8IWU9 490 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 ATRIPQ8WXE1 791 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 NXF3Q9H4D5 531 aaKnown RBP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 BRMS1Q9HCU9 246 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 SPATA6Q9NWH7 488 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-215ENST00000531885 CDH7Q9ULB5 785 aa12.83□□□□□ -0.36
CMTM1-215ENST00000531885 MIA3Q5JRA6 1907 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 KANSL1LA0AUZ9 987 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 M0R2N6 131 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 NCAM2O15394 837 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 PAPLNO95428 1278 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 NPTXRO95502 500 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 AKAP5P24588 427 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 UBXN2BQ14CS0 331 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 ZNF528Q3MIS6 628 aa12.82□□□□□ -0.36
CMTM1-215ENST00000531885 RSPO2Q6UXX9 243 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms