RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 RHOBTB2Q9BYZ6 727 aa19.29■□□□□ 0.68
PKP3-208ENST00000531857 CHST7Q9NS84 486 aa19.29■□□□□ 0.68
PKP3-208ENST00000531857 EPS15L1Q9UBC2 864 aa19.29■□□□□ 0.68
PKP3-208ENST00000531857 CA14Q9ULX7 337 aa19.29■□□□□ 0.68
PKP3-208ENST00000531857 TBX3O15119 743 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 GCFC2P16383 781 aaKnown RBP19.28■□□□□ 0.68
PKP3-208ENST00000531857 AXLP30530 894 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 AMHR2Q16671 573 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 NOTUMQ6P988 496 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 CPLX2Q6PUV4 134 aaKnown RBP19.28■□□□□ 0.68
PKP3-208ENST00000531857 CYP26C1Q6V0L0 522 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 PIK3AP1Q6ZUJ8 805 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 GLYCTKQ8IVS8 523 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 GSTCDQ8NEC7 633 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 ST13P5Q8NFI4 369 aaPredicted RBP19.28■□□□□ 0.68
PKP3-208ENST00000531857 RABGGTAQ92696 567 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 STAMQ92783 540 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 GPR62Q9BZJ7 368 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 NT5C3AQ9H0P0 336 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 CSRNP2Q9H175 543 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 NXF3Q9H4D5 531 aaKnown RBP19.28■□□□□ 0.68
PKP3-208ENST00000531857 ZSWIM4Q9H7M6 989 aa19.28■□□□□ 0.68
PKP3-208ENST00000531857 MIA3Q5JRA6 1907 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 FAM205CA6NFA0 338 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 INO80B-WBP1J3KQ70 363 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 TGM5O43548 720 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 MARCH6O60337 910 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 SLITRK3O94933 977 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 PAPLNO95428 1278 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 ARF4P18085 180 aaPredicted RBP19.27■□□□□ 0.68
PKP3-208ENST00000531857 RPL17P18621 184 aaKnown RBP19.27■□□□□ 0.68
PKP3-208ENST00000531857 AKAP5P24588 427 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 MBTD1Q05BQ5 628 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 CDR2LQ86X02 465 aaPredicted RBP19.27■□□□□ 0.68
PKP3-208ENST00000531857 TPH2Q8IWU9 490 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 ASAP3Q8TDY4 903 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 COLEC11Q9BWP8 271 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 CACNG4Q9UBN1 327 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 DPP7Q9UHL4 492 aa19.27■□□□□ 0.68
PKP3-208ENST00000531857 VWA8A3KMH1 1905 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 SRFP11831 508 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 SCRN1Q12765 414 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 CAPSQ13938 189 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 MXD4Q14582 209 aaPredicted RBP19.26■□□□□ 0.67
PKP3-208ENST00000531857 PCBP1Q15365 356 aaKnown RBP eCLIP19.26■□□□□ 0.67
PKP3-208ENST00000531857 FUT10Q6P4F1 479 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 LILRA6Q6PI73 481 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 ELMSAN1Q6PJG2 1045 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 IFNLR1Q8IU57 520 aaPredicted RBP19.26■□□□□ 0.67
PKP3-208ENST00000531857 GPR152Q8TDT2 470 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 HDAC7Q8WUI4 952 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 CCDC51Q96ER9 411 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 TBC1D17Q9HA65 648 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 PIDD1Q9HB75 910 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 KLK14Q9P0G3 267 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 GIT1Q9Y2X7 761 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 COL4A3Q01955 1670 aa19.26■□□□□ 0.67
PKP3-208ENST00000531857 DMXL1Q9Y485 3027 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 B4GALT5O43286 388 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 NR1I2O75469 434 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 LAMP2P13473 410 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 ID4P47928 161 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 GET4Q7L5D6 327 aaPredicted RBP19.25■□□□□ 0.67
PKP3-208ENST00000531857 RIN2Q8WYP3 895 aaPredicted RBP19.25■□□□□ 0.67
PKP3-208ENST00000531857 PRKD2Q9BZL6 878 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 TM6SF1Q9BZW5 370 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 PLEKHA4Q9H4M7 779 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 PDRG1Q9NUG6 133 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 EP300Q09472 2414 aaPredicted RBP19.25■□□□□ 0.67
PKP3-208ENST00000531857 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
PKP3-208ENST00000531857 TRIP11Q15643 1979 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 NOTCH4Q99466 2003 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 ANHXE9PGG2 379 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 DCNP07585 359 aaKnown RBP19.24■□□□□ 0.67
PKP3-208ENST00000531857 RFX1P22670 979 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 GLRA2P23416 452 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 ARL2P36404 184 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 POU5F1BQ06416 359 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 NCBP1Q09161 790 aaKnown RBP19.24■□□□□ 0.67
PKP3-208ENST00000531857 TFDP1Q14186 410 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 USP41Q3LFD5 358 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 SPECC1Q5M775 1068 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 SLFN12Q8IYM2 578 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 NXPE3Q969Y0 559 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 EIF2AK1Q9BQI3 630 aaKnown RBP19.24■□□□□ 0.67
PKP3-208ENST00000531857 PAAF1Q9BRP4 392 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
PKP3-208ENST00000531857 ZDHHC7Q9NXF8 308 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.24■□□□□ 0.67
PKP3-208ENST00000531857 FNIP2Q9P278 1114 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 ADAM28Q9UKQ2 775 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 R4GN57 208 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 FRYLO94915 3013 aa19.24■□□□□ 0.67
PKP3-208ENST00000531857 A0A087WWV3 80 aa19.23■□□□□ 0.67
PKP3-208ENST00000531857 NPTXRO95502 500 aa19.23■□□□□ 0.67
PKP3-208ENST00000531857 C1RP00736 705 aa19.23■□□□□ 0.67
PKP3-208ENST00000531857 HTR4Q13639 388 aa19.23■□□□□ 0.67
PKP3-208ENST00000531857 PRSS55Q6UWB4 352 aaPredicted RBP19.23■□□□□ 0.67
PKP3-208ENST00000531857 ERMP1Q7Z2K6 904 aa19.23■□□□□ 0.67
PKP3-208ENST00000531857 KCNG4Q8TDN1 519 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms