RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.04□□□□□ -0.8
USF1-210ENST00000531842 COL4A2P08572 1712 aa10.04□□□□□ -0.8
USF1-210ENST00000531842 KIF26AQ9ULI4 1882 aaPredicted RBP10.04□□□□□ -0.8
USF1-210ENST00000531842 ATG2BQ96BY7 2078 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 A0A087WWV3 80 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 KANSL1LA0AUZ9 987 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 B4GALT5O43286 388 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 LAMTOR5O43504 91 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 SLC37A4O43826 429 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 TSPAN1O60635 241 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 SKIP12755 728 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
USF1-210ENST00000531842 KCNA4P22459 653 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 TARSP26639 723 aaKnown RBP10.03□□□□□ -0.8
USF1-210ENST00000531842 SFNP31947 248 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
USF1-210ENST00000531842 DSC1Q08554 894 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 LAMTOR4Q0VGL1 99 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 NONOQ15233 471 aaKnown RBP eCLIP10.03□□□□□ -0.8
USF1-210ENST00000531842 MLF2Q15773 248 aaPredicted RBP10.03□□□□□ -0.8
USF1-210ENST00000531842 NTRK3Q16288 839 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 SLC44A4Q53GD3 710 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 Q6ZUG5 572 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 GSTCDQ8NEC7 633 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 ETNPPLQ8TBG4 499 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 FGF13Q92913 245 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 BRF1Q92994 677 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
USF1-210ENST00000531842 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 GLT8D2Q9H1C3 349 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 USP20Q9Y2K6 914 aa10.03□□□□□ -0.8
USF1-210ENST00000531842 ASPMQ8IZT6 3477 aa10.02□□□□□ -0.8
USF1-210ENST00000531842 PRPF3O43395 683 aaKnown RBP10.02□□□□□ -0.81
USF1-210ENST00000531842 ZMYND10O75800 440 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 SPEM2Q0P670 501 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 ST3GAL2Q16842 350 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 TPRG1Q6ZUI0 275 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 CEP57Q86XR8 500 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 RNF149Q8NC42 400 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 CLSTN3Q9BQT9 956 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 DDX23Q9BUQ8 820 aaKnown RBP10.02□□□□□ -0.81
USF1-210ENST00000531842 INO80BQ9C086 356 aaPredicted RBP10.02□□□□□ -0.81
USF1-210ENST00000531842 LTB4R2Q9NPC1 389 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 HEBP1Q9NRV9 189 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 RGL1Q9NZL6 768 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 ZFYVE26Q68DK2 2539 aa10.02□□□□□ -0.81
USF1-210ENST00000531842 CASTOR2A6NHX0 329 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 TTLL13PA6NNM8 815 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 GDF9O60383 454 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 NPTXRO95502 500 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 PSMC5P62195 406 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 DMWDQ09019 674 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 MTAPQ13126 283 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 SRSF5Q13243 272 aaKnown RBP10.01□□□□□ -0.81
USF1-210ENST00000531842 FZD5Q13467 585 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 Q4G0T1 1027 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 ASAP3Q8TDY4 903 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 ATRIPQ8WXE1 791 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 CEP170P1Q96L14 293 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 BCO2Q9BYV7 579 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 DHX33Q9H6R0 707 aaKnown RBP10.01□□□□□ -0.81
USF1-210ENST00000531842 XPNPEP1Q9NQW7 623 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.01□□□□□ -0.81
USF1-210ENST00000531842 KANSL3Q9P2N6 904 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 VAV3Q9UKW4 847 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 CDV3Q9UKY7 258 aaKnown RBP10.01□□□□□ -0.81
USF1-210ENST00000531842 CDH7Q9ULB5 785 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 NDRG2Q9UN36 371 aaKnown RBP10.01□□□□□ -0.81
USF1-210ENST00000531842 CNTNAP2Q9UHC6 1331 aa10.01□□□□□ -0.81
USF1-210ENST00000531842 LILRB5O75023 590 aa10□□□□□ -0.81
USF1-210ENST00000531842 KIF4AO95239 1232 aa10□□□□□ -0.81
USF1-210ENST00000531842 PAPLNO95428 1278 aa10□□□□□ -0.81
USF1-210ENST00000531842 C8AP07357 584 aa10□□□□□ -0.81
USF1-210ENST00000531842 ARF4P18085 180 aaPredicted RBP10□□□□□ -0.81
USF1-210ENST00000531842 GNA11P29992 359 aa10□□□□□ -0.81
USF1-210ENST00000531842 NLRP5P59047 1200 aa10□□□□□ -0.81
USF1-210ENST00000531842 FGD1P98174 961 aa10□□□□□ -0.81
USF1-210ENST00000531842 CTTNQ14247 550 aaKnown RBP10□□□□□ -0.81
USF1-210ENST00000531842 GRM2Q14416 872 aa10□□□□□ -0.81
USF1-210ENST00000531842 EMC2Q15006 297 aa10□□□□□ -0.81
USF1-210ENST00000531842 NPY5RQ15761 445 aa10□□□□□ -0.81
USF1-210ENST00000531842 AMHR2Q16671 573 aa10□□□□□ -0.81
USF1-210ENST00000531842 INF2Q27J81 1249 aa10□□□□□ -0.81
USF1-210ENST00000531842 SLC5A9Q2M3M2 681 aa10□□□□□ -0.81
USF1-210ENST00000531842 USP41Q3LFD5 358 aa10□□□□□ -0.81
USF1-210ENST00000531842 RSPO2Q6UXX9 243 aaPredicted RBP10□□□□□ -0.81
USF1-210ENST00000531842 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
USF1-210ENST00000531842 SRGAP1Q7Z6B7 1085 aa10□□□□□ -0.81
USF1-210ENST00000531842 FERMT3Q86UX7 667 aa10□□□□□ -0.81
USF1-210ENST00000531842 NPAS3Q8IXF0 933 aa10□□□□□ -0.81
USF1-210ENST00000531842 ZBTB44Q8NCP5 570 aa10□□□□□ -0.81
USF1-210ENST00000531842 SLC7A14Q8TBB6 771 aa10□□□□□ -0.81
USF1-210ENST00000531842 PSPC1Q8WXF1 523 aaKnown RBP10□□□□□ -0.81
USF1-210ENST00000531842 NXPE3Q969Y0 559 aa10□□□□□ -0.81
USF1-210ENST00000531842 MCRS1Q96EZ8 462 aa10□□□□□ -0.81
USF1-210ENST00000531842 MBOAT7Q96N66 472 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms