RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 Q6ZRM9 215 aa6.77□□□□□ -1.33
CASP4-210ENST00000531546 HIPK4Q8NE63 616 aa6.77□□□□□ -1.33
CASP4-210ENST00000531546 ASB15Q8WXK1 588 aa6.77□□□□□ -1.33
CASP4-210ENST00000531546 SLC7A6OSQ96CW6 309 aaPredicted RBP6.77□□□□□ -1.33
CASP4-210ENST00000531546 SMURF1Q9HCE7 757 aa6.77□□□□□ -1.33
CASP4-210ENST00000531546 USP6P35125 1406 aa6.76□□□□□ -1.33
CASP4-210ENST00000531546 H2AFYO75367 372 aaKnown RBP6.76□□□□□ -1.33
CASP4-210ENST00000531546 GCP02774 474 aa6.76□□□□□ -1.33
CASP4-210ENST00000531546 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
CASP4-210ENST00000531546 ADAM15Q13444 863 aa6.76□□□□□ -1.33
CASP4-210ENST00000531546 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
CASP4-210ENST00000531546 GSPT2Q8IYD1 628 aaKnown RBP6.76□□□□□ -1.33
CASP4-210ENST00000531546 SLC6A15Q9H2J7 730 aa6.76□□□□□ -1.33
CASP4-210ENST00000531546 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
CASP4-210ENST00000531546 KCNK3O14649 394 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 SRGAP2CP0DJJ0 459 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 LACTBP83111 547 aaPredicted RBP6.75□□□□□ -1.33
CASP4-210ENST00000531546 LRCH2Q5VUJ6 765 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 MRGPREQ86SM8 312 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 ZC3H7AQ8IWR0 971 aaKnown RBP6.75□□□□□ -1.33
CASP4-210ENST00000531546 SYNE4Q8N205 404 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 SLC25A43Q8WUT9 341 aaPredicted RBP6.75□□□□□ -1.33
CASP4-210ENST00000531546 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
CASP4-210ENST00000531546 CDC6Q99741 560 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 SPATA9Q9BWV2 254 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 GPR87Q9BY21 358 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 KCNH7Q9NS40 1196 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 BCL9O00512 1426 aa6.75□□□□□ -1.33
CASP4-210ENST00000531546 TNRC6CQ9HCJ0 1690 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 PKD1L3Q7Z443 1732 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 FOXP2O15409 715 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 PPFIA4O75335 1185 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 LMNAP02545 664 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 APPP05067 770 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 DNM2P50570 870 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 ADCY7P51828 1080 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 ATXN1P54253 815 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 MRPS21P82921 87 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 ELAVL1Q15717 326 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 COL23A1Q86Y22 540 aaPredicted RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 NOSTRINQ8IVI9 506 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 GFM2Q969S9 779 aaKnown RBP6.74□□□□□ -1.33
CASP4-210ENST00000531546 GBP4Q96PP9 640 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 TRPM1Q7Z4N2 1603 aa6.74□□□□□ -1.33
CASP4-210ENST00000531546 ITSN1Q15811 1721 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 CPDO75976 1380 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 CICQ96RK0 1608 aaPredicted RBP6.73□□□□□ -1.33
CASP4-210ENST00000531546 TRBV23-1A0A0A0MS06 115 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 PRAMEF22A3QJZ6 481 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 SCDO00767 359 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 NUDT3O95989 172 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 STAT3P40763 770 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 ATP2C1P98194 919 aaPredicted RBP6.73□□□□□ -1.33
CASP4-210ENST00000531546 RAB33AQ14088 237 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 GCDHQ92947 438 aaPredicted RBP6.73□□□□□ -1.33
CASP4-210ENST00000531546 LENG9Q96B70 501 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 RNF181Q9P0P0 153 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 SPATA31E1Q6ZUB1 1445 aa6.73□□□□□ -1.33
CASP4-210ENST00000531546 RAB3GAP2Q9H2M9 1393 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 PROZP22891 400 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 SDHAP31040 664 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 IL12RB1P42701 662 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 GABREP78334 506 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 SEC23AQ15436 765 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 FAM111BQ6SJ93 734 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 GAREM2Q75VX8 874 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 NPM2Q86SE8 214 aaKnown RBP6.72□□□□□ -1.33
CASP4-210ENST00000531546 BCL6BQ8N143 479 aaPredicted RBP6.72□□□□□ -1.33
CASP4-210ENST00000531546 C14orf93Q9H972 538 aaKnown RBP6.72□□□□□ -1.33
CASP4-210ENST00000531546 PTGFRNQ9P2B2 879 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 SAE1Q9UBE0 346 aaPredicted RBP6.72□□□□□ -1.33
CASP4-210ENST00000531546 PACSIN3Q9UKS6 424 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 WDR17Q8IZU2 1322 aa6.72□□□□□ -1.33
CASP4-210ENST00000531546 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
CASP4-210ENST00000531546 GOLGA6L6A8MZA4 724 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 E9PSI1 815 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 C6orf222P0C671 652 aaPredicted RBP6.71□□□□□ -1.34
CASP4-210ENST00000531546 RGS19P49795 217 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 CSRP2Q16527 193 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 RABL3Q5HYI8 236 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 MBNL2Q5VZF2 373 aaKnown RBP6.71□□□□□ -1.34
CASP4-210ENST00000531546 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 CISD2Q8N5K1 135 aaKnown RBP6.71□□□□□ -1.34
CASP4-210ENST00000531546 ZNF764Q96H86 408 aaPredicted RBP6.71□□□□□ -1.34
CASP4-210ENST00000531546 NAF1Q96HR8 494 aaKnown RBP6.71□□□□□ -1.34
CASP4-210ENST00000531546 CCNL1Q9UK58 526 aaPredicted RBP6.71□□□□□ -1.34
CASP4-210ENST00000531546 RGPD5Q99666 1765 aa6.71□□□□□ -1.34
CASP4-210ENST00000531546 FAM20BO75063 409 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 BPIFB4P59827 614 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 LY6G5CQ5SRR4 150 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 MFSD5Q6N075 450 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 RHOUQ7L0Q8 258 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 ZNF276Q8N554 614 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 ANKRD53Q8N9V6 530 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 TCF25Q9BQ70 676 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
CASP4-210ENST00000531546 DENND2AQ9ULE3 1009 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms