RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TBC1D7Q9P0N9 293 aa15.86■□□□□ 0.13
CPSF1-206ENST00000531480 MSRAQ9UJ68 235 aa15.86■□□□□ 0.13
CPSF1-206ENST00000531480 LRFN2Q9ULH4 789 aa15.86■□□□□ 0.13
CPSF1-206ENST00000531480 UBE4BO95155 1302 aa15.86■□□□□ 0.13
CPSF1-206ENST00000531480 TRIP11Q15643 1979 aa15.86■□□□□ 0.13
CPSF1-206ENST00000531480 PDCD11Q14690 1871 aaKnown RBP15.85■□□□□ 0.13
CPSF1-206ENST00000531480 LCHNA4D1U4 455 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 FAM189A1O60320 539 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 KINO60870 393 aaKnown RBP15.85■□□□□ 0.13
CPSF1-206ENST00000531480 OFD1O75665 1012 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 ARHGEF15O94989 841 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 GCNT3O95395 438 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 NPTXRO95502 500 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 MYOGP15173 224 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 STK4Q13043 487 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 PNOCQ13519 176 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 APBB1IPQ7Z5R6 666 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-206ENST00000531480 KIAA0895Q8NCT3 520 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 SCFD1Q8WVM8 642 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 ZBTB45Q96K62 511 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-206ENST00000531480 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 ACCSQ96QU6 501 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 YME1L1Q96TA2 773 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 ZBED2Q9BTP6 218 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 RNF39Q9H2S5 420 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 MTMR10Q9NXD2 777 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 GIT1Q9Y2X7 761 aa15.85■□□□□ 0.13
CPSF1-206ENST00000531480 TDRD15B5MCY1 1934 aaKnown RBP15.85■□□□□ 0.13
CPSF1-206ENST00000531480 CDH23Q9H251 3354 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 A0A0B4J269 797 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 LINC01553A4QN01 128 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 HNRNPDLO14979 420 aaKnown RBP15.84■□□□□ 0.13
CPSF1-206ENST00000531480 CA3P07451 260 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 FGFR1P11362 822 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 GRM5P41594 1212 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 TAP1Q03518 808 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 NOLC1Q14978 699 aaKnown RBP eCLIP15.84■□□□□ 0.13
CPSF1-206ENST00000531480 COBLL1Q53SF7 1204 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 FAM117BQ6P1L5 589 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 STXBP4Q6ZWJ1 553 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 GSTCDQ8NEC7 633 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 TMEM174Q8WUU8 243 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 LPPQ93052 612 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 TIFAQ96CG3 184 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 TRIM6Q9C030 488 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-206ENST00000531480 TMEM206Q9H813 350 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 RSAD1Q9HA92 442 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 EXOC1Q9NV70 894 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 HOOK1Q9UJC3 728 aaKnown RBP15.84■□□□□ 0.13
CPSF1-206ENST00000531480 EXOC7Q9UPT5 735 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 HES2Q9Y543 173 aa15.84■□□□□ 0.13
CPSF1-206ENST00000531480 ANK1P16157 1881 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ANKRD63C9JTQ0 380 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 CLDN3O15551 220 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ITGA4P13612 1032 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ADSSP30520 456 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 LIG4P49917 911 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 GATMP50440 423 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 POU5F1Q01860 360 aaKnown RBP15.83■□□□□ 0.12
CPSF1-206ENST00000531480 SKOR2Q2VWA4 1001 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 XKR4Q5GH76 650 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ZNF697Q5TEC3 545 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 HACE1Q8IYU2 909 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 NKX2-4Q9H2Z4 354 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 SLC39A2Q9NP94 309 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 PCDHA5Q9Y5H7 936 aa15.83■□□□□ 0.12
CPSF1-206ENST00000531480 TGFB1I1O43294 461 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 PRPF6O94906 941 aaKnown RBP15.82■□□□□ 0.12
CPSF1-206ENST00000531480 ADRB2P07550 413 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 ERVK-21P61565 698 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 SNRPFP62306 86 aaKnown RBP15.82■□□□□ 0.12
CPSF1-206ENST00000531480 SLFN12LQ6IEE8 588 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 GLB1LQ6UWU2 654 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 LRRC55Q6ZSA7 311 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 CEP120Q8N960 986 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 HELQQ8TDG4 1101 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 BICD1Q96G01 975 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 GUCD1Q96NT3 240 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 MRPL9Q9BYD2 267 aaKnown RBP15.82■□□□□ 0.12
CPSF1-206ENST00000531480 IKZF4Q9H2S9 585 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 TTYH1Q9H313 450 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-206ENST00000531480 CWH43Q9H720 699 aa15.82■□□□□ 0.12
CPSF1-206ENST00000531480 ARL5CA6NH57 179 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 TBKBP1A7MCY6 615 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 TISP43B9A030 160 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 C5orf67F2Z3F1 127 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 OGTO15294 1046 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 MEFVO15553 781 aaPredicted RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 RECQL4O94761 1208 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 SMC2O95347 1197 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 GARTP22102 1010 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 AFF1P51825 1210 aaKnown RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 BTG3Q14201 252 aaPredicted RBP15.81■□□□□ 0.12
CPSF1-206ENST00000531480 KYAT1Q16773 422 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 NOMO2Q5JPE7 1267 aa15.81■□□□□ 0.12
CPSF1-206ENST00000531480 C12orf56Q8IXR9 622 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms