RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CACNG4Q9UBN1 327 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 WNT16Q9UBV4 365 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 DDX25Q9UHL0 483 aaKnown RBP10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 FBXL21Q9UKT6 434 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 CA14Q9ULX7 337 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 FAN1Q9Y2M0 1017 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 IPPQ9Y573 584 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 CNTNAP2Q9UHC6 1331 aa10.28□□□□□ -0.76
CHMP4A-205ENST00000531158 DCDC2BA2VCK2 349 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 CARNS1A5YM72 827 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 ANHXE9PGG2 379 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 LRRN2O75325 713 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 ALDH2P05091 517 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 URODP06132 367 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 ADRB1P08588 477 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 QARSP47897 775 aaKnown RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 GLUD2P49448 558 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 SCNN1GP51170 649 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 DSG1Q02413 1049 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 HTR4Q13639 388 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 EMC2Q15006 297 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 NFKBIBQ15653 356 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 EARS2Q5JPH6 523 aaKnown RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 SRGAP1Q7Z6B7 1085 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 MAML2Q8IZL2 1156 aaPredicted RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 RIN2Q8WYP3 895 aaPredicted RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 RABGGTAQ92696 567 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 CPB2Q96IY4 423 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 RTP3Q9BQQ7 232 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 GPR62Q9BZJ7 368 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 CXCL16Q9H2A7 254 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 NXF3Q9H4D5 531 aaKnown RBP10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 TBC1D17Q9HA65 648 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 RGL1Q9NZL6 768 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 KCNJ14Q9UNX9 436 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 TICRRQ7Z2Z1 1910 aa10.27□□□□□ -0.77
CHMP4A-205ENST00000531158 FAM205CA6NFA0 338 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 SPDYE4A6NLX3 237 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 B4GALT5O43286 388 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 TGM5O43548 720 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 GLUD1P00367 558 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 ADH1AP07327 375 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 DCNP07585 359 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 SRFP11831 508 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 LAMP2P13473 410 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 RPL17P18621 184 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 YWHABP31946 246 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 OR1G1P47890 313 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 AKAP17AQ02040 695 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 MBTD1Q05BQ5 628 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 DMWDQ09019 674 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 LILRA6Q6PI73 481 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 FERMT3Q86UX7 667 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 PALB2Q86YC2 1186 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 RNF149Q8NC42 400 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 OXER1Q8TDS5 423 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 ASAP3Q8TDY4 903 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 PSPC1Q8WXF1 523 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 SLC7A3Q8WY07 619 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 SMG7Q92540 1137 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 CEP170P1Q96L14 293 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 PAAF1Q9BRP4 392 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 LXNQ9BS40 222 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 NT5C3AQ9H0P0 336 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 KANSL3Q9P2N6 904 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 F5P12259 2224 aa10.26□□□□□ -0.77
CHMP4A-205ENST00000531158 CITO14578 2027 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 DEXIO95424 95 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 ITGA4P13612 1032 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 ARF4P18085 180 aaPredicted RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 RFC5P40937 340 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 RBM25P49756 843 aaKnown RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 PTENP60484 403 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 CAPSQ13938 189 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 NONOQ15233 471 aaKnown RBP eCLIP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 SPECC1Q5M775 1068 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 RTP2Q5QGT7 225 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 CDR2LQ86X02 465 aaPredicted RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 IFNLR1Q8IU57 520 aaPredicted RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 GLYCTKQ8IVS8 523 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 C4orf19Q8IY42 314 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 FGF14Q92915 247 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 DYDC2Q96IM9 177 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 FAM193BQ96PV7 902 aaPredicted RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 JPH2Q9BR39 696 aaPredicted RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 PHF20Q9BVI0 1012 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 FOXQ1Q9C009 403 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 ARHGEF3Q9NR81 526 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 STK39Q9UEW8 545 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 CDV3Q9UKY7 258 aaKnown RBP10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 NUMBLQ9Y6R0 609 aa10.25□□□□□ -0.77
CHMP4A-205ENST00000531158 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 FAM208BQ5VWN6 2430 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 TTLL13PA6NNM8 815 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 WNT7AO00755 349 aa10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-205ENST00000531158 SP9P0CG40 484 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms