RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 FZD8Q9H461 694 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 SH2B1Q9NRF2 756 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-205ENST00000531042 PRMT7Q9NVM4 692 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-205ENST00000531042 SSX2IPQ9Y2D8 614 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 MYO10Q9HD67 2058 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 F8W810 466 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 NR1I2O75469 434 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 TRAPPC10P48553 1259 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 FAM187BQ17R55 369 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 KIAA0319Q5VV43 1072 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 PADI6Q6TGC4 694 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 GPR149Q86SP6 731 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 ZBTB8OSQ8IWT0 167 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 ZDHHC14Q8IZN3 488 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 KREMEN2Q8NCW0 462 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 COLEC11Q9BWP8 271 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 PARP2Q9UGN5 583 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 SORCS3Q9UPU3 1222 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 USTQ9Y2C2 406 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 ZMYM2Q9UBW7 1377 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 KMT2EQ8IZD2 1858 aa17.47■□□□□ 0.39
CPSF1-205ENST00000531042 PLXNA3P51805 1871 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 ARHGEF35A5YM69 484 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 TEX28O15482 410 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 CYP11B2P19099 503 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 MUTP22033 750 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 GLUD2P49448 558 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 DSG1Q02413 1049 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 MTMR3Q13615 1198 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
CPSF1-205ENST00000531042 IER5LQ5T953 404 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 ALYREFQ86V81 257 aaKnown RBP17.46■□□□□ 0.39
CPSF1-205ENST00000531042 PLCD3Q8N3E9 789 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 C4orf32Q8N8J7 132 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 TDRD5Q8NAT2 981 aaKnown RBP17.46■□□□□ 0.39
CPSF1-205ENST00000531042 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 C2orf40Q9H1Z8 148 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 RXFP1Q9HBX9 757 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 CHST7Q9NS84 486 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 KLK14Q9P0G3 267 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 C2orf16Q68DN1 1984 aa17.46■□□□□ 0.39
CPSF1-205ENST00000531042 SPDYE4A6NLX3 237 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 ADH1AP07327 375 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 NAMPTP43490 491 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.389e-7■■■■□ 20.7
CPSF1-205ENST00000531042 GRIK3Q13003 919 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 NBR1Q14596 966 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 ECM1Q16610 540 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 C15orf39Q6ZRI6 1047 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 UBALD2Q8IYN6 164 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 PRSS33Q8NF86 280 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 PDZD7Q9H5P4 517 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 LIMD1Q9UGP4 676 aa17.45■□□□□ 0.38
CPSF1-205ENST00000531042 NOL7Q9UMY1 257 aaKnown RBP17.45■□□□□ 0.38
CPSF1-205ENST00000531042 PIEZO1Q92508 2521 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 N4BP3O15049 544 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 BRD1O95696 1058 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 ASGR2P07307 311 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.388e-10■■■■□ 20.5
CPSF1-205ENST00000531042 CCT6AP40227 531 aaKnown RBP17.44■□□□□ 0.38
CPSF1-205ENST00000531042 PRPF4BQ13523 1007 aaKnown RBP17.44■□□□□ 0.38
CPSF1-205ENST00000531042 MAPK6Q16659 721 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 C8orf34Q49A92 452 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 FUT10Q6P4F1 479 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 CCDC149Q6ZUS6 474 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 CMASQ8NFW8 434 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-205ENST00000531042 PRRX2Q99811 253 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 GPR62Q9BZJ7 368 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 CCDC113Q9H0I3 377 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 MAN1C1Q9NR34 630 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 LRWD1Q9UFC0 647 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 ADAM28Q9UKQ2 775 aa17.44■□□□□ 0.38
CPSF1-205ENST00000531042 ACKR2O00590 384 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 GLUD1P00367 558 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 PDGFBP01127 241 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-205ENST00000531042 PRKCBP05771 671 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 TOB1P50616 345 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-205ENST00000531042 VCPP55072 806 aaKnown RBP17.43■□□□□ 0.38
CPSF1-205ENST00000531042 PDIA5Q14554 519 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 PPP2R5AQ15172 486 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 USP41Q3LFD5 358 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 GPR65Q8IYL9 337 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 DEPTORQ8TB45 409 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 B3GALT6Q96L58 329 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 DPP7Q9UHL4 492 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 USP20Q9Y2K6 914 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 MTCL1Q9Y4B5 1905 aaKnown RBP17.43■□□□□ 0.38
CPSF1-205ENST00000531042 ZDBF2Q9HCK1 2354 aa17.43■□□□□ 0.38
CPSF1-205ENST00000531042 PTGESO14684 152 aa17.42■□□□□ 0.38
CPSF1-205ENST00000531042 C1RP00736 705 aa17.42■□□□□ 0.38
CPSF1-205ENST00000531042 EDN1P05305 212 aa17.42■□□□□ 0.38
CPSF1-205ENST00000531042 LIG1P18858 919 aa17.42■□□□□ 0.38
CPSF1-205ENST00000531042 AVPR2P30518 371 aa17.42■□□□□ 0.38
CPSF1-205ENST00000531042 MRE11P49959 708 aa17.42■□□□□ 0.38
CPSF1-205ENST00000531042 PTGDRQ13258 359 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms