RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SLC7A6OSQ96CW6 309 aaPredicted RBP9.5□□□□□ -0.89
CSDE1-213ENST00000530784 TCAF1Q9Y4C2 921 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
CSDE1-213ENST00000530784 AFF2P51816 1311 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
CSDE1-213ENST00000530784 A0A0A6YYK5 440 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-213ENST00000530784 INSRRP14616 1297 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 RPS19P39019 145 aaKnown RBP9.49□□□□□ -0.89
CSDE1-213ENST00000530784 SELENOPP49908 381 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 SAFB2Q14151 953 aaKnown RBP eCLIP9.49□□□□□ -0.89
CSDE1-213ENST00000530784 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 FRMD7Q6ZUT3 714 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 CLEC14AQ86T13 490 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 CXorf67Q86X51 503 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-213ENST00000530784 SHCBP1Q8NEM2 672 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
CSDE1-213ENST00000530784 TTC1Q99614 292 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 SOX7Q9BT81 388 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 SLC6A15Q9H2J7 730 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
CSDE1-213ENST00000530784 PRSS38A1L453 326 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 PMS2P1A4D2B8 440 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 ZEB2O60315 1214 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 KDM1AO60341 852 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 TCIRG1Q13488 830 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 GGNQ86UU5 652 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 PALM2Q8IXS6 379 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 ANKRD53Q8N9V6 530 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 PLA2G15Q8NCC3 412 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 RABGGTAQ92696 567 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 HIST1H2AHQ96KK5 128 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 RPL10LQ96L21 214 aaKnown RBP9.48□□□□□ -0.89
CSDE1-213ENST00000530784 HIST1H2AJQ99878 128 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 ANO3Q9BYT9 981 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 NELFAQ9H3P2 528 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 MSL2Q9HCI7 577 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 NOC2LQ9Y3T9 749 aaKnown RBP9.48□□□□□ -0.89
CSDE1-213ENST00000530784 LAMC1P11047 1609 aa9.48□□□□□ -0.89
CSDE1-213ENST00000530784 ST20-MTHFSA0A0A6YYL1 179 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 PFKMP08237 780 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 COMTP21964 271 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 BPIFB4P59827 614 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 FOXL1Q12952 345 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 RIN1Q13671 783 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 R3HDM1Q15032 1099 aaKnown RBP9.47□□□□□ -0.89
CSDE1-213ENST00000530784 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 RASSF3Q86WH2 238 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 PLA2G3Q9NZ20 509 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 USP18Q9UMW8 372 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 TSC22D4Q9Y3Q8 395 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 PCDHB6Q9Y5E3 794 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 PPP2R3BQ9Y5P8 575 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 PPLO60437 1756 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 RGS12O14924 1447 aa9.47□□□□□ -0.89
CSDE1-213ENST00000530784 CDC42BPGQ6DT37 1551 aa9.46□□□□□ -0.89
CSDE1-213ENST00000530784 DAPK3O43293 454 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 ADAM8P78325 824 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 GRM7Q14831 915 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
CSDE1-213ENST00000530784 Q6ZSN1 163 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 POLNQ7Z5Q5 900 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 AFAP1L2Q8N4X5 818 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 TMEM176AQ96HP8 235 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 ORAI2Q96SN7 254 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 GPHA2Q96T91 129 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 OSBPL6Q9BZF3 934 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 CCDC144AA2RUR9 1427 aa9.46□□□□□ -0.9
CSDE1-213ENST00000530784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 GOLGA8BA8MQT2 603 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 C1QTNF3-AMACRE9PGA6 284 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 CLEC2LP0C7M8 214 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 MSX2P35548 267 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 MANFP55145 182 aaKnown RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 RBM6P78332 1123 aaKnown RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 ZXDCQ2QGD7 858 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 DBX2Q6ZNG2 339 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 CDYL2Q8N8U2 506 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 CLRN3Q8NCR9 226 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 ADOQ96SZ5 270 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 CDK5RAP1Q96SZ6 601 aaKnown RBP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.45□□□□□ -0.9
CSDE1-213ENST00000530784 TMPRSS11EQ9UL52 423 aa9.45□□□□□ -0.9
CSDE1-213ENST00000530784 A0A1W2PRX2 142 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 MUSKO15146 869 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 TOX4O94842 621 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 VIL1P09327 827 aaKnown RBP9.44□□□□□ -0.9
CSDE1-213ENST00000530784 ACO1P21399 889 aaKnown RBP9.44□□□□□ -0.9
CSDE1-213ENST00000530784 PDCD1Q15116 288 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 MAN2A1Q16706 1144 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 LCE5AQ5TCM9 118 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 KRT26Q7Z3Y9 468 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 KCNG1Q9UIX4 513 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 APOBEC2Q9Y235 224 aaKnown RBP9.44□□□□□ -0.9
CSDE1-213ENST00000530784 MYRFQ9Y2G1 1151 aa9.44□□□□□ -0.9
CSDE1-213ENST00000530784 COL22A1Q8NFW1 1626 aaPredicted RBP9.43□□□□□ -0.9
CSDE1-213ENST00000530784 TECPR2O15040 1411 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 SPATA31E1Q6ZUB1 1445 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 ANKRD30BQ9BXX2 1392 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms