RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 C2CD2LO14523 706 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 MUTP22033 750 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 GLUD2P49448 558 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 CLCN4P51793 760 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 CDCA2Q69YH5 1023 aaPredicted RBP23.13■■□□□ 1.29
SMPD1-204ENST00000530395 ELMSAN1Q6PJG2 1045 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 PADI6Q6TGC4 694 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 TMC5Q6UXY8 1006 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 RPS6KC1Q96S38 1066 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 COLEC11Q9BWP8 271 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 MYO10Q9HD67 2058 aa23.13■■□□□ 1.29
SMPD1-204ENST00000530395 LILRB3O75022 631 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 ADH1AP07327 375 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 AKAP5P24588 427 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 PLXNA3P51805 1871 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 GRIK3Q13003 919 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 MTMR3Q13615 1198 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 TMEM132AQ24JP5 1023 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 CDR2LQ86X02 465 aaPredicted RBP23.12■■□□□ 1.29
SMPD1-204ENST00000530395 KMT2EQ8IZD2 1858 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 FBXL6Q8N531 539 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 MIOSQ9NXC5 875 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 PARP2Q9UGN5 583 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 DPP7Q9UHL4 492 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 SORCS3Q9UPU3 1222 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 USTQ9Y2C2 406 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 C2orf16Q68DN1 1984 aa23.12■■□□□ 1.29
SMPD1-204ENST00000530395 N4BP3O15049 544 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 FAM187BQ17R55 369 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 KANK3Q6NY19 840 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 GPR149Q86SP6 731 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 UBALD2Q8IYN6 164 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 PLCD3Q8N3E9 789 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 KREMEN2Q8NCW0 462 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 PRRX2Q99811 253 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 FZD8Q9H461 694 aa23.11■■□□□ 1.29
SMPD1-204ENST00000530395 CYP11B2P19099 503 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 CCT6AP40227 531 aaKnown RBP23.1■■□□□ 1.29
SMPD1-204ENST00000530395 FXR2P51116 673 aaKnown RBP eCLIP23.1■■□□□ 1.29
SMPD1-204ENST00000530395 NHLH1Q02575 133 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 PPP2R5AQ15172 486 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 MAPK6Q16659 721 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 RNF168Q8IYW5 571 aaPredicted RBP23.1■■□□□ 1.29
SMPD1-204ENST00000530395 ZDHHC14Q8IZN3 488 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 DEPTORQ8TB45 409 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 ASIC4Q96FT7 647 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 RAB34Q9BZG1 259 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 KLK14Q9P0G3 267 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 STK24Q9Y6E0 443 aa23.1■■□□□ 1.29
SMPD1-204ENST00000530395 NAMPTP43490 491 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 PRPF4BQ13523 1007 aaKnown RBP23.09■■□□□ 1.29
SMPD1-204ENST00000530395 C15orf39Q6ZRI6 1047 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 CCDC149Q6ZUS6 474 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 TAS1R1Q7RTX1 841 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 ACSF2Q96CM8 615 aaPredicted RBP23.09■■□□□ 1.29
SMPD1-204ENST00000530395 IFT74Q96LB3 600 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 ADPGKQ9BRR6 497 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 MAN1C1Q9NR34 630 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 LRWD1Q9UFC0 647 aa23.09■■□□□ 1.29
SMPD1-204ENST00000530395 TEX28O15482 410 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 EFEMP2O95967 443 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 GLUD1P00367 558 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 PRKCBP05771 671 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 DSG1Q02413 1049 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 KIAA0319Q5VV43 1072 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 FUT10Q6P4F1 479 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 GSTCDQ8NEC7 633 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 BSNDQ8WZ55 320 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 KIF2CQ99661 725 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 PDZD7Q9H5P4 517 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 RXFP1Q9HBX9 757 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.08■■□□□ 1.29
SMPD1-204ENST00000530395 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
SMPD1-204ENST00000530395 ADAM28Q9UKQ2 775 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 KIF3AQ9Y496 699 aa23.08■■□□□ 1.29
SMPD1-204ENST00000530395 MTCL1Q9Y4B5 1905 aaKnown RBP23.08■■□□□ 1.28
SMPD1-204ENST00000530395 F8W810 466 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 LIG1P18858 919 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 U2AF2P26368 475 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMPD1-204ENST00000530395 NBR1Q14596 966 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 USP41Q3LFD5 358 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 C8orf34Q49A92 452 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 OTOP3Q7RTS5 596 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 CMASQ8NFW8 434 aaPredicted RBP23.07■■□□□ 1.28
SMPD1-204ENST00000530395 KIFAP3Q92845 792 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 BHMT2Q9H2M3 363 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 CHST7Q9NS84 486 aa23.07■■□□□ 1.28
SMPD1-204ENST00000530395 ACKR2O00590 384 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 TADA2AO75478 443 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 EFNA5P52803 228 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 PTPN5P54829 565 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 CREMQ03060 361 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 TUSC3Q13454 348 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 PDIA5Q14554 519 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 HSP90AA2PQ14568 343 aaPredicted RBP23.06■■□□□ 1.28
SMPD1-204ENST00000530395 GPR65Q8IYL9 337 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 C4orf32Q8N8J7 132 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 SNX29Q8TEQ0 813 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 CCDC113Q9H0I3 377 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 LIMD1Q9UGP4 676 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms