RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 MARCH5Q9NX47 278 aa6.28□□□□□ -1.4
CTSB-216ENST00000530290 GDE1Q9NZC3 331 aa6.28□□□□□ -1.4
CTSB-216ENST00000530290 SEPT9Q9UHD8 586 aaPredicted RBP6.28□□□□□ -1.4
CTSB-216ENST00000530290 FBXW11Q9UKB1 542 aa6.28□□□□□ -1.4
CTSB-216ENST00000530290 GIT1Q9Y2X7 761 aa6.28□□□□□ -1.4
CTSB-216ENST00000530290 COL4A3BPQ9Y5P4 624 aa6.28□□□□□ -1.4
CTSB-216ENST00000530290 RBM8AQ9Y5S9 174 aaKnown RBP6.28□□□□□ -1.4
CTSB-216ENST00000530290 IGF2RP11717 2491 aa6.28□□□□□ -1.4
CTSB-216ENST00000530290 ARID2Q68CP9 1835 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 NOTCH4Q99466 2003 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 C2CD2LO14523 706 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 PAPSS2O95340 614 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 ZIC2O95409 532 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 SSBP05455 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
CTSB-216ENST00000530290 ITGA4P13612 1032 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 RXRAP19793 462 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 FGFR4P22455 802 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 TGM1P22735 817 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 RFC5P40937 340 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 OR1G1P47890 313 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 MLLT6P55198 1093 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 GPC5P78333 572 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 FUT2Q10981 343 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 GRIK3Q13003 919 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 CSRP2Q16527 193 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 MTERF2Q49AM1 385 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 PPM1LQ5SGD2 360 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 LRCH2Q5VUJ6 765 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 DIEXFQ68CQ4 756 aaKnown RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 FUT10Q6P4F1 479 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 LILRA6Q6PI73 481 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 MOXD1Q6UVY6 613 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 TPRG1Q6ZUI0 275 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 MIER3Q7Z3K6 550 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 ZNF280BQ86YH2 543 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 RHPN2Q8IUC4 686 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 CMTR1Q8N1G2 835 aaKnown RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 CCDC82Q8N4S0 544 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 PIK3R5Q8WYR1 880 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 SLC5A5Q92911 643 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 FGF13Q92913 245 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 FGF14Q92915 247 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 LENG9Q96B70 501 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 PGBD1Q96JS3 809 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 NLRP4Q96MN2 994 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 RNF39Q9H2S5 420 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 TRPV5Q9NQA5 729 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 FAM217BQ9NTX9 383 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 SUCLA2Q9P2R7 463 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 ADAM28Q9UKQ2 775 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 PRG3Q9Y2Y8 225 aaPredicted RBP6.27□□□□□ -1.41
CTSB-216ENST00000530290 NID2Q14112 1375 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 VWA8A3KMH1 1905 aa6.27□□□□□ -1.41
CTSB-216ENST00000530290 ACACAQ13085 2346 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 hCG_1642624A0A1W2PR95 340 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 DCDC2BA2VCK2 349 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 TMEM8BA6NDV4 472 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 GOLGA8AA7E2F4 631 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 GOLGA8BA8MQT2 603 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 B4GALT3O60512 393 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 DDHD2O94830 711 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 MICAL2O94851 1124 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 C8AP07357 584 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 HMGB1P09429 215 aaKnown RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 GSPT1P15170 499 aaKnown RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 TARSP26639 723 aaKnown RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 PMLP29590 882 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 MLH1P40692 756 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 PSMC5P62195 406 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 AKAP17AQ02040 695 aaKnown RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 POU5F1BQ06416 359 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 TFDP1Q14186 410 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 LRRC32Q14392 662 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 KRT32Q14532 448 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 MXD4Q14582 209 aaPredicted RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 Q4G0T1 1027 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 AXDND1Q5T1B0 1012 aaPredicted RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 JAKMIP3Q5VZ66 844 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 IL31Q6EBC2 164 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 PARM1Q6UWI2 310 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 PRR23CQ6ZRP0 262 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 TRMT1LQ7Z2T5 733 aaKnown RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 IFNLR1Q8IU57 520 aaPredicted RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 DEPDC1BQ8WUY9 529 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 ELSPBP1Q96BH3 223 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 LOXL4Q96JB6 756 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 CEP89Q96ST8 783 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 NFKBIZQ9BYH8 718 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 TRIM6Q9C030 488 aaPredicted RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 IFT122Q9HBG6 1241 aa6.26□□□□□ -1.41
CTSB-216ENST00000530290 V9GY48 417 aaPredicted RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 PDCD11Q14690 1871 aaKnown RBP6.26□□□□□ -1.41
CTSB-216ENST00000530290 ARL5CA6NH57 179 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 MEIS3P2A8K0S8 358 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 SLC27A2O14975 620 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 MSH4O15457 936 aa6.25□□□□□ -1.41
CTSB-216ENST00000530290 CHMP2AO43633 222 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms