RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
SCN3B-206ENST00000530277 G3BP2Q9UN86 482 aaKnown RBP13.21□□□□□ -0.29
SCN3B-206ENST00000530277 ATRNO75882 1429 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 PEX10O60683 326 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 SREBF1P36956 1147 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 MDH1P40925 334 aaKnown RBP13.21□□□□□ -0.3
SCN3B-206ENST00000530277 GPS1Q13098 491 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 PPP2R5EQ16537 467 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 FAM47CQ5HY64 1035 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 ERICH1Q86X53 443 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 VPS52Q8N1B4 723 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.3
SCN3B-206ENST00000530277 TBC1D22BQ9NU19 505 aa13.21□□□□□ -0.3
SCN3B-206ENST00000530277 SYNGAP1Q96PV0 1343 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 KCTD2Q14681 263 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 RSBN1LQ6PCB5 846 aaPredicted RBP13.2□□□□□ -0.3
SCN3B-206ENST00000530277 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 NME8Q8N427 588 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
SCN3B-206ENST00000530277 BAP1Q92560 729 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 TLR2O60603 784 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 KRT10P13645 584 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 PSMA2P25787 234 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 TMEM62Q0P6H9 643 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 LRRC8CQ8TDW0 803 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 KRT35Q92764 455 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 ATP6V0A4Q9HBG4 840 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 TUFT1Q9NNX1 390 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 F8VZ95 297 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 CHN1P15882 459 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 PEX19P40855 299 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 AMPD2Q01433 879 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 PPATQ06203 517 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 CLUL1Q15846 466 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 LLGL2Q6P1M3 1020 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
SCN3B-206ENST00000530277 TATDN2Q93075 761 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 PIM2Q9P1W9 311 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 SUGT1Q9Y2Z0 365 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 COMMD10Q9Y6G5 202 aa13.2□□□□□ -0.3
SCN3B-206ENST00000530277 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 MARCKSL1P49006 195 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 ANGEL2Q5VTE6 544 aaKnown RBP13.19□□□□□ -0.3
SCN3B-206ENST00000530277 ARHGEF19Q8IW93 802 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 GRK7Q8WTQ7 553 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 FAM151AQ8WW52 585 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
SCN3B-206ENST00000530277 COL1A1P02452 1464 aaPredicted RBP13.19□□□□□ -0.3
SCN3B-206ENST00000530277 NUMBP49757 651 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 BPIFB4P59827 614 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 HADHQ16836 314 aaKnown RBP13.19□□□□□ -0.3
SCN3B-206ENST00000530277 WDR72Q3MJ13 1102 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 FIGNQ5HY92 759 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 SMC6Q96SB8 1091 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 JPH1Q9HDC5 661 aaPredicted RBP13.19□□□□□ -0.3
SCN3B-206ENST00000530277 SEL1LQ9UBV2 794 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 MAP2K7O14733 419 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 SUN1O94901 812 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 PLS3P13797 630 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 KRT76Q01546 638 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 ZNF568Q3ZCX4 644 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 CYP4A22Q5TCH4 519 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 KIF2BQ8N4N8 673 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 CCNYQ8ND76 341 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 MIS12Q9H081 205 aa13.19□□□□□ -0.3
SCN3B-206ENST00000530277 CAND2O75155 1236 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 SLC12A3P55017 1021 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 PRKCEQ02156 737 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 KCNT1Q5JUK3 1230 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 NBPF12Q5TAG4 269 aaPredicted RBP13.18□□□□□ -0.3
SCN3B-206ENST00000530277 DARS2Q6PI48 645 aaKnown RBP13.18□□□□□ -0.3
SCN3B-206ENST00000530277 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 TCP11X1B4DZS4 312 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
SCN3B-206ENST00000530277 FGRP09769 529 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 GUCY2CP25092 1073 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 ITIH3Q06033 890 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 TKFCQ3LXA3 575 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms