RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TARS2Q9BW92 718 aaKnown RBP13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 LRRC27Q9C0I9 530 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 MIOSQ9NXC5 875 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 KCNH3Q9ULD8 1083 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 EYSQ5T1H1 3165 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 ABLIM1O14639 778 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 FGF18O76093 207 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 DDHD2O94830 711 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 POMCP01189 267 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 PROZP22891 400 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 DNAJB1P25685 340 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 NMT1P30419 496 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 PBX3P40426 434 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 MLH1P40692 756 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 BCAR1P56945 870 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 UBE3AQ05086 875 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 ZNF280BQ86YH2 543 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 FAM178BQ8IXR5 827 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 SLC39A11Q8N1S5 342 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 SLC17A8Q8NDX2 589 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 GSTCDQ8NEC7 633 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 POF1BQ8WVV4 589 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 STAMQ92783 540 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 ZFP42Q96MM3 310 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 TNMDQ9H2S6 317 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 ST6GALNAC4Q9H4F1 302 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 SNTG2Q9NY99 539 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 SPG21Q9NZD8 308 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 PARP2Q9UGN5 583 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 TBX20Q9UMR3 447 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 ZMYM2Q9UBW7 1377 aa13.91□□□□□ -0.18
CCDC90B-216ENST00000529856 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 CARNS1A5YM72 827 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 K7ENM7 598 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 TOM1L1O75674 476 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 GALTP07902 379 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 GAP43P17677 238 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 ABCD1P33897 745 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 PPM1AP35813 382 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 SCNN1GP51170 649 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 GTF2BQ00403 316 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 AMPD3Q01432 767 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 MPZL3Q6UWV2 235 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 ZNF720Q7Z2F6 126 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 SFR1Q86XK3 245 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 ZBTB45Q96K62 511 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 FAM193BQ96PV7 902 aaPredicted RBP13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 TMEM175Q9BSA9 504 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 CDT1Q9H211 546 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 MAGEF1Q9HAY2 307 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 KLK14Q9P0G3 267 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 SEL1LQ9UBV2 794 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 LZTS1Q9Y250 596 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 PLXNA4Q9HCM2 1894 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 REV3LO60673 3130 aa13.9□□□□□ -0.18
CCDC90B-216ENST00000529856 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 B4GALT3O60512 393 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 RECQL4O94761 1208 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 PIGRP01833 764 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 ALDH2P05091 517 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 MCF2P10911 925 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 IDEP14735 1019 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 GRM5P41594 1212 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 SLC11A1P49279 550 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 KRT17Q04695 432 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 DSC1Q08554 894 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 ZNF568Q3ZCX4 644 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 HERC4Q5GLZ8 1057 aaPredicted RBP13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 ZBTB33Q86T24 672 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 COLGALT2Q8IYK4 626 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 MRPS27Q92552 414 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 C7orf25Q9BPX7 421 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 STRA6Q9BX79 667 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 TRIM9Q9C026 710 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 NSUN3Q9H649 340 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 GDPD2Q9HCC8 539 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 PUF60Q9UHX1 559 aaKnown RBP13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 HPSEQ9Y251 543 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 GDAQ9Y2T3 454 aa13.89□□□□□ -0.19
CCDC90B-216ENST00000529856 TDRD15B5MCY1 1934 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 FAM237AA0A1B0GTK4 181 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 A0A1W2PQ27 194 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 A0A1W2PQ64 194 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 A0A1W2PQD8 194 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 CLDN3O15551 220 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms