RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 RTN2O75298 545 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 MAP3K6O95382 1288 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 MT-ND3P03897 115 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 KITP10721 976 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 CBWD6Q4V339 395 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 CBWD3Q5JTY5 395 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 CBWD5Q5RIA9 395 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 SLC47A2Q86VL8 602 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 KCTD6Q8NC69 237 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 MAML1Q92585 1016 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 CFAP36Q96G28 342 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 TSNARE1Q96NA8 513 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 CYTH2Q99418 400 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 TRIM6Q9C030 488 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 XRN1Q8IZH2 1706 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 FAM187AA6NFU0 413 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 F8VZ95 297 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 RASSF2P50749 326 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 PDIA2Q13087 525 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 BAATQ14032 418 aaPredicted RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 SNRNP48Q6IEG0 339 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 DARS2Q6PI48 645 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 ERICH1Q86X53 443 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 SULF1Q8IWU6 871 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 FAM149B1Q96BN6 582 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 UNC45AQ9H3U1 944 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 TMBIM4Q9HC24 238 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 SEL1LQ9UBV2 794 aa10.57□□□□□ -0.72
CCDC90B-214ENST00000529689 AFF2P51816 1311 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 TNNC2P02585 160 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 GNA15P30679 374 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 PHBP35232 272 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 FLT3P36888 993 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 NT5C2P49902 561 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 DAB2IPQ5VWQ8 1189 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 SYN2Q92777 582 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 CFAP57Q96MR6 1250 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 ZHX2Q9Y6X8 837 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 AKAP12Q02952 1782 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 CIB2O75838 187 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 PIAS1O75925 651 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 KRT10P13645 584 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 PSMA2P25787 234 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 MARCKSL1P49006 195 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 AARSP49588 968 aaKnown RBP eCLIP10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 ARSEP51690 589 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 MAPK7Q13164 816 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 DHX34Q14147 1143 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 SLC35G1Q2M3R5 365 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 OR6B2Q6IFH4 312 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 RPAINQ86UA6 219 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 FAM160B2Q86V87 743 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 ZBTB8OSQ8IWT0 167 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 PHF2O75151 1096 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 CNGA1P29973 690 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 DNAJC3Q13217 504 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 PPP2R5AQ15172 486 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 RBM15Q96T37 977 aaKnown RBP eCLIP10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 AIPL1Q9NZN9 384 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 COMMD10Q9Y6G5 202 aa10.56□□□□□ -0.72
CCDC90B-214ENST00000529689 DIAPH2O60879 1101 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 HMGB2P26583 209 aaKnown RBP10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 POLR2BP30876 1174 aaKnown RBP10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 ITGA8P53708 1063 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 P3H1Q32P28 736 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 RNF34Q969K3 372 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 CALR3Q96L12 384 aaKnown RBP10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 WNT8AQ9H1J5 351 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 MYH10P35580 1976 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 CFAP69A5D8W1 941 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 RALAP11233 206 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 SMARCA1P28370 1054 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 PSMC4P43686 418 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 DLG4P78352 724 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 IFRD2Q12894 506 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 TMEM119Q4V9L6 283 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 ZNF720Q7Z2F6 126 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 PDIK1LQ8N165 341 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 NME8Q8N427 588 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 CERS5Q8N5B7 392 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 BBOF1Q8ND07 529 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 TAS1R2Q8TE23 839 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 RAB3IPQ96QF0 476 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 SLC13A1Q9BZW2 595 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 CARD9Q9H257 536 aa10.55□□□□□ -0.72
CCDC90B-214ENST00000529689 PABPC3Q9H361 631 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms