RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 THNSL1Q8IYQ7 743 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 SLC39A11Q8N1S5 342 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 URGCPQ8TCY9 931 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 POF1BQ8WVV4 589 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 SPATA32Q96LK8 384 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 CXCL16Q9H2A7 254 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 CUEDC2Q9H467 287 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 ST6GALNAC4Q9H4F1 302 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 SNTG2Q9NY99 539 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 SPG21Q9NZD8 308 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 DNAJB4Q9UDY4 337 aa17.71■□□□□ 0.43
TSPAN4-218ENST00000529566 XIRP2A4UGR9 3374 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 H0YCG3 227 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 SCP2P22307 547 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 CMA1P23946 247 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 NMT1P30419 496 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 IRS1P35568 1242 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ALDH7A1P49419 539 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 GTF2BQ00403 316 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 UBE3AQ05086 875 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 DSC1Q08554 894 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ADALQ6DHV7 355 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 TMEM173Q86WV6 379 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 HACE1Q8IYU2 909 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 IQUBQ8NA54 791 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 BCL7CQ8WUZ0 217 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 STAMQ92783 540 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 DHX58Q96C10 678 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ZBTB45Q96K62 511 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ADPGKQ9BRR6 497 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 STRA6Q9BX79 667 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 HAPLN2Q9GZV7 340 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 SCAND2PQ9GZW5 306 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 CDT1Q9H211 546 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ZHX3Q9H4I2 956 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 KLK14Q9P0G3 267 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 TBX20Q9UMR3 447 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 LZTS1Q9Y250 596 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 TCHHQ07283 1943 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 A0A0C4DFX4 3053 aa17.7■□□□□ 0.42
TSPAN4-218ENST00000529566 PLXNA4Q9HCM2 1894 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 NT5C1B-RDH14C9J2C7 533 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 FSCN2O14926 492 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 ZC3H11AO75152 810 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 RECQL4O94761 1208 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 PPM1AP35813 382 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 SLC11A1P49279 550 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 SCNN1GP51170 649 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 ERVFC1P60507 584 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 RNASELQ05823 741 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 STRN3Q13033 797 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 COL19A1Q14993 1142 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 CNNM4Q6P4Q7 775 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 SFR1Q86XK3 245 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 FAM178BQ8IXR5 827 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 COLGALT2Q8IYK4 626 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 MRPS27Q92552 414 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 FAM13BQ9NYF5 915 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 KCNH3Q9ULD8 1083 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 HPSEQ9Y251 543 aa17.69■□□□□ 0.42
TSPAN4-218ENST00000529566 FAM237AA0A1B0GTK4 181 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 K7ENM7 598 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 PTGESO14684 152 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 MEFVO15553 781 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 TOM1L1O75674 476 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 PPP1R37O75864 691 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 PIGRP01833 764 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 MCF2P10911 925 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 GAP43P17677 238 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 GRM5P41594 1212 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 TIGD5Q53EQ6 642 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 TCEAL5Q5H9L2 206 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 MPZL3Q6UWV2 235 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 ALKAL1Q6UXT8 129 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 CEP120Q8N960 986 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 IGSF21Q96ID5 467 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 TMEM175Q9BSA9 504 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 GBP3Q9H0R5 595 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 NSUN3Q9H649 340 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 SEL1LQ9UBV2 794 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 PCDHGC5Q9Y5F6 944 aa17.68■□□□□ 0.42
TSPAN4-218ENST00000529566 MCL1Q07820 350 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 NAB2Q15742 525 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 ZNF568Q3ZCX4 644 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 XKR4Q5GH76 650 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 SLC39A4Q6P5W5 647 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 APBB1IPQ7Z5R6 666 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 ZBTB33Q86T24 672 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 MAP4K3Q8IVH8 894 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 SLC17A8Q8NDX2 589 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 C7orf25Q9BPX7 421 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms