RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CABP7Q86V35 215 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 PLD6Q8N2A8 252 aaKnown RBP4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 GPATCH11Q8N954 259 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 SLC30A5Q8TAD4 765 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 ASB11Q8WXH4 323 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 ZNF566Q969W8 418 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 MRGPRX4Q96LA9 322 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 SEC62Q99442 399 aaKnown RBP4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 PLCD4Q9BRC7 762 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 BRIP1Q9BX63 1249 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 SORBS1Q9BX66 1292 aaKnown RBP4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 AMNQ9BXJ7 453 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 CNTD2Q9H8S5 307 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 LRRC4CQ9HCJ2 640 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 ARHGAP28Q9P2N2 729 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 SLC45A1Q9Y2W3 748 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 SIT1Q9Y3P8 196 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 CNTNAP5Q8WYK1 1306 aa4.19□□□□□ -1.74
AMBRA1-208ENST00000529558 A0A0U1RQG5 324 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 A0A1W2PQJ5 194 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 NOTOA8MTQ0 251 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TCERG1O14776 1098 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 HNRNPDLO14979 420 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 NPC1O15118 1278 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 CUTAO60888 179 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SEC24DO94855 1032 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 CD4P01730 458 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 IFIT1P09914 478 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 ZGLP1P0C6A0 271 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 NPR1P16066 1061 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 EN2P19622 333 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 CAPN3P20807 821 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 FGFR2P21802 821 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 COL8A1P27658 744 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 THBS2P35442 1172 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SERPINF1P36955 418 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 POU5F1Q01860 360 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TAF5Q15542 800 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SLC14A2Q15849 920 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TAF12Q16514 161 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 AOC3Q16853 763 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 VPS53Q5VIR6 699 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 BICRALQ6AI39 1079 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TTLL5Q6EMB2 1281 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 FAAH2Q6GMR7 532 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 GLB1L2Q8IW92 636 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TXLNBQ8N3L3 684 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 GALNT15Q8N3T1 639 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SH2D3CQ8N5H7 860 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 MSL3Q8N5Y2 521 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 ANKS4BQ8N8V4 417 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 ATG16L2Q8NAA4 619 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 NUP43Q8NFH3 380 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 HOXB13Q92826 284 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 HIST1H2AHQ96KK5 128 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 MRGPRX1Q96LB2 322 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 HIST1H2AJQ99878 128 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 VRK1Q99986 396 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 FDXACB1Q9BRP7 624 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SLC26A6Q9BXS9 759 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 ADAMTS10Q9H324 1103 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 ALG13Q9NP73 1137 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SARS2Q9NP81 518 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 OBP2BQ9NPH6 170 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 INCENPQ9NQS7 918 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SMC4Q9NTJ3 1288 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 GJB4Q9NTQ9 266 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TDP1Q9NUW8 608 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 PIH1D1Q9NWS0 290 aaKnown RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 STK32BQ9NY57 414 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 DACT1Q9NYF0 836 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 HSPBP1Q9NZL4 362 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 KCMF1Q9P0J7 381 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 CALCOCO1Q9P1Z2 691 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 COL20A1Q9P218 1284 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 LRFN1Q9P244 771 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 IFT80Q9P2H3 777 aaPredicted RBP4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 ABCF2Q9UG63 623 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 CPA4Q9UI42 421 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TMEM98Q9Y2Y6 226 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 TAF6LQ9Y6J9 622 aa4.18□□□□□ -1.74
AMBRA1-208ENST00000529558 A0A0A6YYK5 440 aaPredicted RBP4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 LGALS16A8MUM7 142 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 ACKR2O00590 384 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 AREL1O15033 823 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 IRAK2O43187 625 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 FIBPO43427 364 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 LRG1P02750 347 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 APEX1P27695 318 aaKnown RBP4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 SLC6A9P48067 706 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 NRG3P56975 720 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 TARDBPQ13148 414 aaKnown RBP eCLIP4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 GRM1Q13255 1194 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 SNAPC2Q13487 334 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 PTK2BQ14289 1009 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 SPARCL1Q14515 664 aa4.17□□□□□ -1.74
AMBRA1-208ENST00000529558 TOMM20Q15388 145 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms