RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 DNASE1L2Q92874 299 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 GPR62Q9BZJ7 368 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 GDE1Q9NZC3 331 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 GDF9O60383 454 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 STBD1O95210 358 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 LPAL2Q16609 132 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 UGCGQ16739 394 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 PPM1LQ5SGD2 360 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 PRR23BQ6ZRT6 265 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 SMG8Q8ND04 991 aaKnown RBP13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 ITFG1Q8TB96 612 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 LENG9Q96B70 501 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 KXD1Q9BQD3 176 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
AMBRA1-207ENST00000529553 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
AMBRA1-207ENST00000529553 ESYT2A0FGR8 921 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 CHMLP26374 656 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 AXLP30530 894 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 CXCL12P48061 93 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 NTHL1P78549 312 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 SLC5A5Q92911 643 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 ELSPBP1Q96BH3 223 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 CCDC51Q96ER9 411 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 NLRP4Q96MN2 994 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 MIOSQ9NXC5 875 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 SEPT9Q9UHD8 586 aaPredicted RBP13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 GIT1Q9Y2X7 761 aa13.02□□□□□ -0.33
AMBRA1-207ENST00000529553 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 MSH4O15457 936 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 SGSM2O43147 1006 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 HRO43593 1189 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 GAS7O60861 476 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 TADA2AO75478 443 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 PAPSS2O95340 614 aaPredicted RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 C8AP07357 584 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 RPL17P18621 184 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 USP11P51784 963 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 NCBP1Q09161 790 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 PDXDC1Q6P996 788 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 NPAS3Q8IXF0 933 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 B3GALT6Q96L58 329 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 GAD1Q99259 594 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 TEKT3Q9BXF9 490 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 C6orf50Q9HD87 102 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 AVENQ9NQS1 362 aaPredicted RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 PPME1Q9Y570 386 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 IPPQ9Y573 584 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 COL4A3BPQ9Y5P4 624 aa13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 RBM8AQ9Y5S9 174 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 ANKRD11Q6UB99 2663 aaPredicted RBP13.01□□□□□ -0.33
AMBRA1-207ENST00000529553 ASPMQ8IZT6 3477 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 MYH9P35579 1960 aaKnown RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.332e-7■■■■■ 129.2
AMBRA1-207ENST00000529553 SOBPA7XYQ1 873 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 F8W810 466 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 CCL16O15467 120 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 ASAP2O43150 1006 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 GNA11P29992 359 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 MLH1P40692 756 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 MLLT6P55198 1093 aaPredicted RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 PABPC1LQ4VXU2 614 aaKnown RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 LONP2Q86WA8 852 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 HACE1Q8IYU2 909 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 SPEM1Q8N4L4 309 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 PRPF31Q8WWY3 499 aaKnown RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 PIK3R5Q8WYR1 880 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 TTPALQ9BTX7 342 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 PLA2G2FQ9BZM2 168 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 RNF39Q9H2S5 420 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 DNMT3BQ9UBC3 853 aaKnown RBP13□□□□□ -0.33
AMBRA1-207ENST00000529553 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
AMBRA1-207ENST00000529553 TMEM8BA6NDV4 472 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 PSMD10O75832 226 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 ZNF806P0C7X5 589 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 KCNA4P22459 653 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms