RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 LRRIQ4A6NIV6 560 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 URODP06132 367 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 MTMR3Q13615 1198 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 RNF168Q8IYW5 571 aaPredicted RBP17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 BSNDQ8WZ55 320 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 GPR62Q9BZJ7 368 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 TRIM6Q9C030 488 aaPredicted RBP17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 CXCL16Q9H2A7 254 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 SFXN1Q9H9B4 322 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 FAM86C1Q9NVL1 165 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 KMT2EQ8IZD2 1858 aa17.22■□□□□ 0.35
CLNS1A-210ENST00000528364 GLUD2P49448 558 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 PTPN5P54829 565 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 SLC27A1Q6PCB7 646 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 POTEGQ6S5H5 508 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 PALB2Q86YC2 1186 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 COLEC11Q9BWP8 271 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 TUFT1Q9NNX1 390 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 MAN1C1Q9NR34 630 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 USTQ9Y2C2 406 aa17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 TDRD15B5MCY1 1934 aaKnown RBP17.21■□□□□ 0.35
CLNS1A-210ENST00000528364 RFPL2O75678 378 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 RPL17P18621 184 aaKnown RBP17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 LIG1P18858 919 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 DSG1Q02413 1049 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 SAFBQ15424 915 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 ECM1Q16610 540 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 PADI6Q6TGC4 694 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 GLYCTKQ8IVS8 523 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 UBALD2Q8IYN6 164 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 PAAF1Q9BRP4 392 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 FZD8Q9H461 694 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 CHST7Q9NS84 486 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 STK39Q9UEW8 545 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 C2orf16Q68DN1 1984 aa17.2■□□□□ 0.34
CLNS1A-210ENST00000528364 PLXNA3P51805 1871 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 CCDC195A0A1B0GUA6 201 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 N4BP1O75113 896 aaKnown RBP17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 EDN1P05305 212 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 OR52Z1P0C646 297 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 NBR1Q14596 966 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 FUT10Q6P4F1 479 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 CCDC149Q6ZUS6 474 aa17.19■□□□□ 0.34
CLNS1A-210ENST00000528364 DOCK6Q96HP0 2047 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 H0Y858 1186 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 NR1I2O75469 434 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 GLUD1P00367 558 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 ADH1AP07327 375 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 CYP11B2P19099 503 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 EEF1DP3Q658K8 133 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 CDCA2Q69YH5 1023 aaPredicted RBP17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 NOSTRINQ8IVI9 506 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 TMEM105Q8N8V8 129 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 RIN2Q8WYP3 895 aaPredicted RBP17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 ACSF2Q96CM8 615 aaPredicted RBP17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 PRRX2Q99811 253 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 PDZD7Q9H5P4 517 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 SNTG2Q9NY99 539 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
CLNS1A-210ENST00000528364 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 TADA2AO75478 443 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 RPA1P27694 616 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 GRIK3Q13003 919 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 FAM187BQ17R55 369 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 USP41Q3LFD5 358 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 TTC38Q5R3I4 469 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 PRSS55Q6UWB4 352 aaPredicted RBP17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 CMASQ8NFW8 434 aaPredicted RBP17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 FBXO18Q8NFZ0 1043 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 HASPINQ8TF76 798 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 RSAD2Q8WXG1 361 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 ZNF707Q96C28 371 aaPredicted RBP17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 KIF2CQ99661 725 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 KIFC3Q9BVG8 833 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 FOXP1Q9H334 677 aaPredicted RBP17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 KCNK12Q9HB15 430 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
CLNS1A-210ENST00000528364 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 ZFHX2Q9C0A1 2572 aaPredicted RBP17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 PTGESO14684 152 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 TGM5O43548 720 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms