RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ZNF808Q8N4W9 903 aaPredicted RBP7.63□□□□□ -1.19
PCF11-202ENST00000528336 OR2I1PQ8NGU4 316 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 STON2Q8WXE9 905 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 ADOQ96SZ5 270 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 LDAHQ9H6V9 325 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 TRPS1Q9UHF7 1281 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 IP6K2Q9UHH9 426 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 SAP30BPQ9UHR5 308 aaKnown RBP7.63□□□□□ -1.19
PCF11-202ENST00000528336 TCAF1Q9Y4C2 921 aa7.63□□□□□ -1.19
PCF11-202ENST00000528336 GASTP01350 101 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 CRHR1P34998 444 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 SLC16A1P53985 500 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 MCL1Q07820 350 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 ELAVL1Q15717 326 aaKnown RBP7.62□□□□□ -1.19
PCF11-202ENST00000528336 UAP1L1Q3KQV9 507 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 PRAMEF14Q5SWL7 426 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 OR7D4Q8NG98 312 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 MPHOSPH9Q99550 1183 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 KLC2Q9H0B6 622 aa7.62□□□□□ -1.19
PCF11-202ENST00000528336 CAPN14A8MX76 684 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 S100BP04271 92 aaPredicted RBP7.61□□□□□ -1.19
PCF11-202ENST00000528336 MAGEA10P43363 369 aaPredicted RBP7.61□□□□□ -1.19
PCF11-202ENST00000528336 MGAT2Q10469 447 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 CPA6Q8N4T0 437 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 MB21D1Q8N884 522 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 HOXB13Q92826 284 aaPredicted RBP7.61□□□□□ -1.19
PCF11-202ENST00000528336 FAM89AQ96GI7 184 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 C7orf25Q9BPX7 421 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 BCO1Q9HAY6 547 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 LIMCH1Q9UPQ0 1083 aa7.61□□□□□ -1.19
PCF11-202ENST00000528336 FAM171A2A8MVW0 826 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 MFAP3LO75121 409 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 ZRANB2O95218 330 aaKnown RBP eCLIP7.6□□□□□ -1.19
PCF11-202ENST00000528336 IL33O95760 270 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 HIBADHP31937 336 aaKnown RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 RAB27AP51159 221 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 SPTY2D1Q68D10 685 aaPredicted RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 MFSD5Q6N075 450 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 MAMDC4Q6UXC1 1216 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 PDZD4Q76G19 769 aaPredicted RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 PRRT2Q7Z6L0 340 aaPredicted RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 XYLT1Q86Y38 959 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 CERS3Q8IU89 383 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 RHOT1Q8IXI2 618 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 PALM2Q8IXS6 379 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 RAVER1Q8IY67 606 aaKnown RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 GSPT2Q8IYD1 628 aaKnown RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 TRMT2AQ8IZ69 625 aaKnown RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 MIER2Q8N344 545 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 TTC9BQ8N6N2 239 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.6□□□□□ -1.19
PCF11-202ENST00000528336 CCHCR1Q8TD31 782 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 COA7Q96BR5 231 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 CPPED1Q9BRF8 314 aaPredicted RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 PDCD2LQ9BRP1 358 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 SERPINB13Q9UIV8 391 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 G3BP2Q9UN86 482 aaKnown RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 HDAC5Q9UQL6 1122 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 JAG2Q9Y219 1238 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
PCF11-202ENST00000528336 PCDHA13Q9Y5I0 950 aa7.6□□□□□ -1.19
PCF11-202ENST00000528336 CCDC154A6NI56 674 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 B8ZZF3 427 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 ENDOD1O94919 500 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 CT47B1P0C2W7 299 aaPredicted RBP7.59□□□□□ -1.19
PCF11-202ENST00000528336 GNAT2P19087 354 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 SREBF1P36956 1147 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 SELENOPP49908 381 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 MFSD14BQ5SR56 506 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 CMTR2Q8IYT2 770 aaKnown RBP7.59□□□□□ -1.19
PCF11-202ENST00000528336 RAB24Q969Q5 203 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 HSPBAP1Q96EW2 488 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 CEP95Q96GE4 821 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 SENP6Q9GZR1 1112 aaPredicted RBP7.59□□□□□ -1.19
PCF11-202ENST00000528336 HECAQ9UBI9 543 aaPredicted RBP7.59□□□□□ -1.19
PCF11-202ENST00000528336 SIK3Q9Y2K2 1263 aa7.59□□□□□ -1.19
PCF11-202ENST00000528336 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 HTRA2O43464 458 aaPredicted RBP7.58□□□□□ -1.2
PCF11-202ENST00000528336 AKAP10O43572 662 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 EDNRBP24530 442 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 WASP42768 502 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 SLC6A9P48067 706 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 ADKP55263 362 aaKnown RBP7.58□□□□□ -1.2
PCF11-202ENST00000528336 EFEMP1Q12805 493 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 IL10RAQ13651 578 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 C3orf36Q3SXR2 165 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 SPATS1Q496A3 300 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 GJC2Q5T442 439 aaPredicted RBP7.58□□□□□ -1.2
PCF11-202ENST00000528336 ANKS6Q68DC2 871 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 MIGA2Q7L4E1 593 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 ANKRD35Q8N283 1001 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 DVL3Q92997 716 aaPredicted RBP7.58□□□□□ -1.2
PCF11-202ENST00000528336 HDAC10Q969S8 669 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 MIEF2Q96C03 454 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 BORCS6Q96GS4 357 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 CSRNP2Q9H175 543 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 LANCL2Q9NS86 450 aa7.58□□□□□ -1.2
PCF11-202ENST00000528336 AJAP1Q9UKB5 411 aaPredicted RBP7.58□□□□□ -1.2
PCF11-202ENST00000528336 IPPQ9Y573 584 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms