RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TMEM132AQ24JP5 1023 aa36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 GSTCDQ8NEC7 633 aa36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 TMEM134Q9H6X4 195 aa36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 KCNG1Q9UIX4 513 aa36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 BARX2Q9UMQ3 279 aaPredicted RBP36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 K7ERI5 159 aa36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 NRP1O14786 923 aa36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 EDN1P05305 212 aa36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 AKAP5P24588 427 aa36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 PEX3P56589 373 aa36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 DCAF4L1Q3SXM0 396 aa36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 NTPCRQ9BSD7 190 aaKnown RBP36.4■■■■□ 3.42
SSSCA1-205ENST00000527920 CXCL14O95715 111 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 PLA2G4BP0C869 781 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 GRIK3Q13003 919 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 ADHFE1Q8IWW8 467 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 CALML4Q96GE6 196 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 VN1R3Q9BXE9 311 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 MIOSQ9NXC5 875 aa36.39■■■■□ 3.42
SSSCA1-205ENST00000527920 CCDC169A6NNP5 214 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 ZP2Q05996 745 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 ATF7IP2Q5U623 682 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 APBB1IPQ7Z5R6 666 aaPredicted RBP36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 GJD3Q8N144 294 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 SPIRE2Q8WWL2 714 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 KMT5AQ9NQR1 393 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 PARP2Q9UGN5 583 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 MTMR6Q9Y217 621 aa36.38■■■■□ 3.41
SSSCA1-205ENST00000527920 NR1I2O75469 434 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 SSBP05455 408 aaKnown RBP eCLIP36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 LIG1P18858 919 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 PTPAQ15257 358 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 NT5DC1Q5TFE4 455 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 RPS6KC1Q96S38 1066 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 PLIN2Q99541 437 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 CD320Q9NPF0 282 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 MARCH5Q9NX47 278 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 TNFSF13BQ9Y275 285 aa36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 MORC2Q9Y6X9 1032 aaPredicted RBP36.37■■■■□ 3.41
SSSCA1-205ENST00000527920 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP36.36■■■■□ 3.41
SSSCA1-205ENST00000527920 HOXB8P17481 243 aaPredicted RBP36.36■■■■□ 3.41
SSSCA1-205ENST00000527920 RBM10P98175 930 aaKnown RBP36.36■■■■□ 3.41
SSSCA1-205ENST00000527920 EEF1DP3Q658K8 133 aa36.36■■■■□ 3.41
SSSCA1-205ENST00000527920 CASP10Q92851 521 aa36.36■■■■□ 3.41
SSSCA1-205ENST00000527920 POP1Q99575 1024 aaKnown RBP36.36■■■■□ 3.41
SSSCA1-205ENST00000527920 C19orf67A6NJJ6 358 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 PLS3P13797 630 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 OR1G1P47890 313 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 GRIN1Q05586 938 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 ZSCAN16Q9H4T2 348 aaPredicted RBP36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 USP20Q9Y2K6 914 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 HCFC2Q9Y5Z7 792 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 CLIC4Q9Y696 253 aa36.35■■■■□ 3.41
SSSCA1-205ENST00000527920 STX6O43752 255 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 CLASP2O75122 1294 aaKnown RBP36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 EFEMP2O95967 443 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 PTPN14Q15678 1187 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 ANKRD54Q6NXT1 300 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 MRPL4Q9BYD3 311 aaKnown RBP36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 CCSER1Q9C0I3 900 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 SNTG2Q9NY99 539 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 KLK14Q9P0G3 267 aa36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 PRG3Q9Y2Y8 225 aaPredicted RBP36.34■■■■□ 3.41
SSSCA1-205ENST00000527920 RECQL4O94761 1208 aa36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 SOD2P04179 222 aa36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 TAS1R3Q7RTX0 852 aa36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 RNF168Q8IYW5 571 aaPredicted RBP36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 KCNN1Q92952 543 aa36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 ACO2Q99798 780 aaKnown RBP36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 COLEC11Q9BWP8 271 aa36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 ODF2LQ9ULJ1 636 aa36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 USP15Q9Y4E8 981 aaPredicted RBP36.33■■■■□ 3.41
SSSCA1-205ENST00000527920 SMTNP53814 917 aa36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 AUTS2Q8WXX7 1259 aa36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 SUSD6Q92537 303 aa36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 HERC2P3Q9BVR0 1158 aa36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 PTPRHQ9HD43 1115 aa36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 BLOC1S4Q9NUP1 217 aa36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 SRPRBQ9Y5M8 271 aaKnown RBP36.32■■■■□ 3.4
SSSCA1-205ENST00000527920 SSTR3P32745 418 aaPredicted RBP36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 CA8P35219 290 aa36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 ARSHQ5FYA8 562 aa36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 TMEM87AQ8NBN3 555 aa36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 S1PR5Q9H228 398 aa36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 FOXD4L1Q9NU39 408 aa36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 LARSQ9P2J5 1176 aaKnown RBP36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 FBXO2Q9UK22 296 aaPredicted RBP36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 SSX2IPQ9Y2D8 614 aa36.31■■■■□ 3.4
SSSCA1-205ENST00000527920 SFI1A8K8P3 1242 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 PTGESO14684 152 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 SLC16A4O15374 487 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 LILRB3O75022 631 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 PDIA4P13667 645 aaKnown RBP36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 PLCG1P19174 1290 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 RAD51AP2Q09MP3 1159 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 TUSC3Q13454 348 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 KARSQ15046 597 aaKnown RBP36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 LLGL2Q6P1M3 1020 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 SYCE2Q6PIF2 218 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 PPFIBP1Q86W92 1011 aa36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms