RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CALML4Q96GE6 196 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
CAPN1-213ENST00000527897 MSLNLQ96KJ4 702 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 CD320Q9NPF0 282 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 SNTG2Q9NY99 539 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 CLIC4Q9Y696 253 aa17.12■□□□□ 0.33
CAPN1-213ENST00000527897 FSD2A1L4K1 749 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 NR1I2O75469 434 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-213ENST00000527897 GRIN1Q05586 938 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 HYIQ5T013 277 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 ATF7IP2Q5U623 682 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 DAW1Q8N136 415 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 AK8Q96MA6 479 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 TMEM175Q9BSA9 504 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 GDAQ9Y2T3 454 aa17.11■□□□□ 0.33
CAPN1-213ENST00000527897 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 C2CD2LO14523 706 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 SLC16A4O15374 487 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
CAPN1-213ENST00000527897 MARCKSP29966 332 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-213ENST00000527897 RESTQ13127 1097 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 MAPK7Q13164 816 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
CAPN1-213ENST00000527897 SMAD2Q15796 467 aaKnown RBP17.1■□□□□ 0.33
CAPN1-213ENST00000527897 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 COLGALT2Q8IYK4 626 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-213ENST00000527897 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
CAPN1-213ENST00000527897 F8W810 466 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 RECQL4O94761 1208 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 CTSAP10619 480 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 GUCY2CP25092 1073 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
CAPN1-213ENST00000527897 SLC12A3P55017 1021 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 ZP2Q05996 745 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 COASYQ13057 564 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 ADHFE1Q8IWW8 467 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 SMRP1Q8NCR6 262 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 KHSRPQ92945 711 aaKnown RBP eCLIP17.09■□□□□ 0.33
CAPN1-213ENST00000527897 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 CACNG4Q9UBN1 327 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 USP15Q9Y4E8 981 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-213ENST00000527897 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
CAPN1-213ENST00000527897 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 INPPL1O15357 1258 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 STX6O43752 255 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 CLASP2O75122 1294 aaKnown RBP17.08■□□□□ 0.32
CAPN1-213ENST00000527897 HARSP12081 509 aaKnown RBP17.08■□□□□ 0.32
CAPN1-213ENST00000527897 PLCG1P19174 1290 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 DSC1Q08554 894 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 GRIK3Q13003 919 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-213ENST00000527897 ANKRD54Q6NXT1 300 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 ZBTB33Q86T24 672 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-213ENST00000527897 CASP10Q92851 521 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 TCHPQ9BT92 498 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.32
CAPN1-213ENST00000527897 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 MRPL4Q9BYD3 311 aaKnown RBP17.08■□□□□ 0.32
CAPN1-213ENST00000527897 EPHX3Q9H6B9 360 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 MARCH5Q9NX47 278 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 PRKAG3Q9UGI9 489 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 MTMR6Q9Y217 621 aa17.08■□□□□ 0.32
CAPN1-213ENST00000527897 CASTOR2A6NHX0 329 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
CAPN1-213ENST00000527897 URODP06132 367 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 PLS3P13797 630 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 SMTNP53814 917 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 OSTNP61366 133 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 STRN3Q13033 797 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 GIT2Q14161 759 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 MCM6Q14566 821 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 ZNF568Q3ZCX4 644 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 TAS1R1Q7RTX1 841 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-213ENST00000527897 KCTD17Q8N5Z5 321 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 SPRYD3Q8NCJ5 442 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 HASPINQ8TF76 798 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
CAPN1-213ENST00000527897 EMILIN2Q9BXX0 1053 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 CXCL16Q9H2A7 254 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 ZHX3Q9H4I2 956 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 TMEM134Q9H6X4 195 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 MRPL17Q9NRX2 175 aaKnown RBP17.07■□□□□ 0.32
CAPN1-213ENST00000527897 ARHGAP28Q9P2N2 729 aa17.07■□□□□ 0.32
CAPN1-213ENST00000527897 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms