RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PTPRFP10586 1907 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
USH1C-207ENST00000527720 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
USH1C-207ENST00000527720 HSPA6P17066 643 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 SWSAP1Q6NVH7 229 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 MIS18BP1Q6P0N0 1132 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 ENOSF1Q7L5Y1 443 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 UBL4BQ8N7F7 174 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 POMGNT1Q8WZA1 660 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 SEMA4DQ92854 862 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 SAAL1Q96ER3 474 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 RNPC3Q96LT9 517 aaKnown RBP16.54■□□□□ 0.24
USH1C-207ENST00000527720 KIAA1586Q9HCI6 787 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 FAM114A2Q9NRY5 505 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 ALG6Q9Y672 507 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
USH1C-207ENST00000527720 SGPL1O95470 568 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 CHRNB2P17787 502 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 USP8P40818 1118 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 GUCY2FP51841 1108 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 PTENP60484 403 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 ACTR2P61160 394 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 POU5F1Q01860 360 aaKnown RBP16.54■□□□□ 0.24
USH1C-207ENST00000527720 PRKCEQ02156 737 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
USH1C-207ENST00000527720 XKR3Q5GH77 459 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
USH1C-207ENST00000527720 DCAF12L1Q5VU92 463 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 LRIG3Q6UXM1 1119 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 NOP9Q86U38 636 aaKnown RBP16.54■□□□□ 0.24
USH1C-207ENST00000527720 HELQQ8TDG4 1101 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 PIK3R5Q8WYR1 880 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 KAT5Q92993 513 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 ARHGAP28Q9P2N2 729 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 SEPT9Q9UHD8 586 aaPredicted RBP16.54■□□□□ 0.24
USH1C-207ENST00000527720 BCS1LQ9Y276 419 aa16.54■□□□□ 0.24
USH1C-207ENST00000527720 KIAA0391O15091 583 aaKnown RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 ITGA4P13612 1032 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 SKOR1P84550 965 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 TTMPQ5BVD1 217 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 XPNPEP1Q9NQW7 623 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 AMACRQ9UHK6 382 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 UTP11Q9Y3A2 253 aaKnown RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 HNRNPDLO14979 420 aaKnown RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 ICAM3P32942 547 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 TRADDQ15628 312 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 LRRC31Q6UY01 552 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 CCDC60Q8IWA6 550 aaPredicted RBP16.53■□□□□ 0.24
USH1C-207ENST00000527720 PCDHB18PQ96TA0 734 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 RAB17Q9H0T7 212 aa16.53■□□□□ 0.24
USH1C-207ENST00000527720 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.53■□□□□ 0.24
USH1C-207ENST00000527720 A0A0G2JMZ2 1700 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 ZNF233A6NK53 670 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 CYP26A1O43174 497 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 GGPS1O95749 300 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 PDE6CP51160 858 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 FMO1Q01740 532 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 CDR2Q01850 454 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 GCNT1Q02742 428 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 MTMR3Q13615 1198 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 SH3D19Q5HYK7 790 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 ARL8AQ96BM9 186 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 WNT8AQ9H1J5 351 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 UVRAGQ9P2Y5 699 aa16.52■□□□□ 0.24
USH1C-207ENST00000527720 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.23
USH1C-207ENST00000527720 CYP1A2P05177 515 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 CYP11B1P15538 503 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 DHX34Q14147 1143 aaKnown RBP16.52■□□□□ 0.23
USH1C-207ENST00000527720 EMC10Q5UCC4 262 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 SV2AQ7L0J3 742 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 SLC47A2Q86VL8 602 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 ZSWIM1Q9BR11 485 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 CAPS2Q9BXY5 557 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 GTF3C4Q9UKN8 822 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.23
USH1C-207ENST00000527720 FAM187AA6NFU0 413 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 TTI1O43156 1089 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 ATG7O95352 703 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 CLDN10P78369 228 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 STXBP2Q15833 593 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 TAS1R2Q8TE23 839 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
USH1C-207ENST00000527720 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
USH1C-207ENST00000527720 SSC5DA1L4H1 1573 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms