RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CHMP6Q96FZ7 201 aa12.54□□□□□ -0.4
LINC01001-201ENST00000526704 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
LINC01001-201ENST00000526704 DEFB129Q9H1M3 183 aa12.54□□□□□ -0.4
LINC01001-201ENST00000526704 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
LINC01001-201ENST00000526704 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CCDC169A6NNP5 214 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 DNM1LO00429 736 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 PODXLO00592 558 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 PMM2O15305 246 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CYP26A1O43174 497 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CTNND1O60716 968 aaKnown RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CYP1A2P05177 515 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 MMEP08473 750 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 FGFR4P22455 802 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 GBP1P32455 592 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 RASA3Q14644 834 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 GKAP1Q5VSY0 366 aaPredicted RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SLC13A5Q86YT5 568 aaPredicted RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 ZNF317Q96PQ6 595 aaPredicted RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 PARP2Q9UGN5 583 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 LOC102724159A0A0B4J2E5 919 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 GOLGA8IPA6NC78 632 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SMIM23A6NLE4 172 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 GOLGA8JA6NMD2 632 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CDR1P51861 262 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 MNAT1P51948 309 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 IFI35P80217 286 aaPredicted RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 PWP2Q15269 919 aaKnown RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 EPS8L3Q8TE67 593 aaKnown RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SHC3Q92529 594 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 ART4Q93070 314 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 ST6GALNAC4Q9H4F1 302 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 AGO4Q9HCK5 861 aaKnown RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 SLC40A1Q9NP59 571 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 TMOD2Q9NZR1 351 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 MTRF1LQ9UGC7 380 aaKnown RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
LINC01001-201ENST00000526704 FEM1BQ9UK73 627 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 ZNF536O15090 1300 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
LINC01001-201ENST00000526704 GOLGA6L7A0A1B0GV03 622 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 TLDC2A0PJX2 215 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 NFIBO00712 420 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 SLC16A4O15374 487 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 RGS16O15492 202 aaPredicted RBP12.52□□□□□ -0.4
LINC01001-201ENST00000526704 RIPK2O43353 540 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 RARAP10276 462 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 NCKAP1LP55160 1127 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 MCCD1P59942 119 aaPredicted RBP12.52□□□□□ -0.4
LINC01001-201ENST00000526704 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.4
LINC01001-201ENST00000526704 ADCY2Q08462 1091 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 UGCGQ16739 394 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 TKFCQ3LXA3 575 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.4
LINC01001-201ENST00000526704 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 PPM1KQ8N3J5 372 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.4
LINC01001-201ENST00000526704 FAM151AQ8WW52 585 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 ZNF653Q96CK0 615 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 TMEM109Q9BVC6 243 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.4
LINC01001-201ENST00000526704 H0YIN7 160 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 SPOPO43791 374 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 AGTP01019 485 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 CHRNA5P30532 468 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 PTGER2P43116 358 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 QARSP47897 775 aaKnown RBP12.52□□□□□ -0.41
LINC01001-201ENST00000526704 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 UHMK1Q8TAS1 419 aaKnown RBP12.52□□□□□ -0.41
LINC01001-201ENST00000526704 CCT6BQ92526 530 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC114Q96M63 670 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 JPH2Q9BR39 696 aaPredicted RBP12.52□□□□□ -0.41
LINC01001-201ENST00000526704 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.41
LINC01001-201ENST00000526704 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 CCPG1Q9ULG6 757 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
LINC01001-201ENST00000526704 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.41
LINC01001-201ENST00000526704 LYPLA2O95372 231 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 ICAM1P05362 532 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 CYP11B1P15538 503 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 ADSSP30520 456 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 YWHABP31946 246 aaKnown RBP12.51□□□□□ -0.41
LINC01001-201ENST00000526704 CAP2P40123 477 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 SCTRP47872 440 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 KCNJ1P48048 391 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 PEX3P56589 373 aa12.51□□□□□ -0.41
LINC01001-201ENST00000526704 TNFAIP8L3Q5GJ75 292 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms