RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GBP2P32456 591 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 CLCN4P51793 760 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 BCAR1P56945 870 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 CSTF1Q05048 431 aaKnown RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 PPP2R5CQ13362 524 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 PLCB4Q15147 1175 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 SF3A1Q15459 793 aaKnown RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 FAM228AQ86W67 206 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 TRAPPC12Q8WVT3 735 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 AUTS2Q8WXX7 1259 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 AZI2Q9H6S1 392 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 WRAP73Q9P2S5 460 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 NOL7Q9UMY1 257 aaKnown RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
NEDD8-204ENST00000526430 KANSL1LA0AUZ9 987 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 ANHXE9PGG2 379 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 LRRN2O75325 713 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 PAPLNO95428 1278 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 TXKP42681 527 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 SLC26A2P50443 739 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 CRYBB1P53674 252 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-204ENST00000526430 CALCRLQ16602 461 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 ZNF746Q6NUN9 644 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-204ENST00000526430 ECHDC2Q86YB7 292 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 CCDC60Q8IWA6 550 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-204ENST00000526430 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-204ENST00000526430 STK39Q9UEW8 545 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-204ENST00000526430 COL1A2P08123 1366 aa12.17□□□□□ -0.46
NEDD8-204ENST00000526430 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 ZNF862O60290 1169 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 GAS7O60861 476 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 KLRC1P26715 233 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 PRPHP41219 470 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 DNM1Q05193 864 aaKnown RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 HTR4Q13639 388 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 ECM1Q16610 540 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 UGCGQ16739 394 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 LAIR1Q6GTX8 287 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 RSPO2Q6UXX9 243 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 ZNF598Q86UK7 904 aaKnown RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 TMEM173Q86WV6 379 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 IGSF22Q8N9C0 903 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 IGSF21Q96ID5 467 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 MYADMQ96S97 322 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 HSD17B14Q9BPX1 270 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 DISC1Q9NRI5 854 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
NEDD8-204ENST00000526430 MAFBQ9Y5Q3 323 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
NEDD8-204ENST00000526430 F5P12259 2224 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 NT5C1B-RDH14C9J2C7 533 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 SLITRK3O94933 977 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 LAMP2P13473 410 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
NEDD8-204ENST00000526430 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
NEDD8-204ENST00000526430 PRKCQQ04759 706 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 SPEM2Q0P670 501 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 PDIA5Q14554 519 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-204ENST00000526430 SWSAP1Q6NVH7 229 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-204ENST00000526430 LRRC15Q8TF66 581 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 CEP89Q96ST8 783 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 OSMRQ99650 979 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 DPP7Q9UHL4 492 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-204ENST00000526430 PCDHA10Q9Y5I2 948 aa12.15□□□□□ -0.46
NEDD8-204ENST00000526430 TDRD15B5MCY1 1934 aaKnown RBP12.15□□□□□ -0.46
NEDD8-204ENST00000526430 WDFY3Q8IZQ1 3526 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 A0A0U1RQF3 1178 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 PP2D1A8MPX8 630 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 LAD1O00515 517 aa12.14□□□□□ -0.47
NEDD8-204ENST00000526430 ZBTB39O15060 712 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms