RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CCM2LQ9NUG4 571 aaPredicted RBP5.1□□□□□ -1.59
CD44-219ENST00000525685 AURKAIP1Q9NWT8 199 aaPredicted RBP5.1□□□□□ -1.59
CD44-219ENST00000525685 RIMBP3Q9UFD9 1639 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 TCEAL9Q9UHQ7 104 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 PRSS50Q9UI38 385 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 GIT1Q9Y2X7 761 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 ARHGEF11O15085 1522 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 CAPN14A8MX76 684 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 GABRDO14764 452 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 PFKMP08237 780 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 OSMP13725 252 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 GPR15P49685 360 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 SLC5A3P53794 718 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 MRPS9P82933 396 aaKnown RBP5.09□□□□□ -1.59
CD44-219ENST00000525685 MGAT5Q09328 741 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 FAM180AQ6UWF9 173 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 GAREM2Q75VX8 874 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 PPM1NQ8N819 430 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 PLA2G15Q8NCC3 412 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 C1orf162Q8NEQ5 155 aaPredicted RBP5.09□□□□□ -1.59
CD44-219ENST00000525685 STAG1Q8WVM7 1258 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 MRIQ9BWK5 157 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 ACE2Q9BYF1 805 aaPredicted RBP5.09□□□□□ -1.59
CD44-219ENST00000525685 CSRNP2Q9H175 543 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 ZNF703Q9H7S9 590 aaPredicted RBP5.09□□□□□ -1.59
CD44-219ENST00000525685 IL23AQ9NPF7 189 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 G3BP2Q9UN86 482 aaKnown RBP5.09□□□□□ -1.59
CD44-219ENST00000525685 GPR45Q9Y5Y3 372 aa5.09□□□□□ -1.59
CD44-219ENST00000525685 SHROOM2Q13796 1616 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 CARMIL1Q5VZK9 1371 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 A0A0A6YYK5 440 aaPredicted RBP5.08□□□□□ -1.6
CD44-219ENST00000525685 UBE2QL1A1L167 161 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 K7ESF4 209 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 CYP27B1O15528 508 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 NARSO43776 548 aaKnown RBP5.08□□□□□ -1.6
CD44-219ENST00000525685 TOX4O94842 621 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 ZNF202O95125 648 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 VSIG10L2P0DP72 767 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 HNRNPLP14866 589 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-219ENST00000525685 NEK2P51955 445 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 HMGA2P52926 109 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 TRIM25Q14258 630 aaKnown RBP5.08□□□□□ -1.6
CD44-219ENST00000525685 PLEKHG6Q3KR16 790 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 LSM12Q3MHD2 195 aaKnown RBP5.08□□□□□ -1.6
CD44-219ENST00000525685 CCDC178Q5BJE1 867 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 EFCAB2Q5VUJ9 269 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 FAM111BQ6SJ93 734 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
CD44-219ENST00000525685 ANKRD35Q8N283 1001 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-219ENST00000525685 CHMP4CQ96CF2 233 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 PLEKHG4BQ96PX9 1271 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 SOX7Q9BT81 388 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 IFT122Q9HBG6 1241 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 CEP72Q9P209 647 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 NCDNQ9UBB6 729 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 ING1Q9UK53 422 aaPredicted RBP5.08□□□□□ -1.6
CD44-219ENST00000525685 CDY2AQ9Y6F7 541 aa5.08□□□□□ -1.6
CD44-219ENST00000525685 TNKSO95271 1327 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 PRAMEF4O60810 478 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 JUNP05412 331 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 RRP1BQ14684 758 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 TTF1Q15361 905 aaPredicted RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 PCBP2Q15366 365 aaKnown RBP eCLIP5.07□□□□□ -1.6
CD44-219ENST00000525685 TMPRSS6Q8IU80 811 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 JDP2Q8WYK2 163 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 FATE1Q969F0 183 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 MIEF2Q96C03 454 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 PAWRQ96IZ0 340 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 SLC2A13Q96QE2 648 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 ADI1Q9BV57 179 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 OSBPL6Q9BZF3 934 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 C14orf93Q9H972 538 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 METTL14Q9HCE5 456 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 SAP30BPQ9UHR5 308 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 DNM3Q9UQ16 869 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 LUC7L2Q9Y383 392 aaKnown RBP5.07□□□□□ -1.6
CD44-219ENST00000525685 ERCC6L2Q5T890 1561 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 ARAP1Q96P48 1450 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 PRXQ9BXM0 1461 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 RAPGEF2Q9Y4G8 1499 aa5.07□□□□□ -1.6
CD44-219ENST00000525685 EEA1Q15075 1411 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 CTTNBP2Q8WZ74 1663 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 MTSS1O43312 755 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 RBP3P10745 1247 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 KIR2DL3P43628 341 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 SCNN1GP51170 649 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 CD69Q07108 199 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 ABHD18Q0P651 414 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 MUM1Q2TAK8 710 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 MUM1L1Q5H9M0 696 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 FNDC7Q5VTL7 733 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 Q6ZRM9 215 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 CBARPQ8N350 705 aaPredicted RBP5.06□□□□□ -1.6
CD44-219ENST00000525685 PPP1R14CQ8TAE6 165 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 HOOK2Q96ED9 719 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 TCF25Q9BQ70 676 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 IP6K2Q9UHH9 426 aa5.06□□□□□ -1.6
CD44-219ENST00000525685 EVLQ9UI08 416 aaPredicted RBP5.06□□□□□ -1.6
CD44-219ENST00000525685 PCDHGA2Q9Y5H1 932 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms