RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 RINT1Q6NUQ1 792 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 C1orf186Q6ZWK4 172 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 DAW1Q8N136 415 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 KLK14Q9P0G3 267 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 USP15Q9Y4E8 981 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-204ENST00000524797 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 SLC26A4O43511 780 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 CABP7Q86V35 215 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 KCTD17Q8N5Z5 321 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 GSTCDQ8NEC7 633 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 CASP10Q92851 521 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 PLIN2Q99541 437 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 HERC2P3Q9BVR0 1158 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 NT5C3AQ9H0P0 336 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 PRG3Q9Y2Y8 225 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 IRAK3Q9Y616 596 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 CITO14578 2027 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 PDCD11Q14690 1871 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 CCDC169A6NNP5 214 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 BMP15O95972 392 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 PDCP20941 246 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 OR1G1P47890 313 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 NPTX2P47972 431 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 PEX3P56589 373 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 GIT2Q14161 759 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 SYCE2Q6PIF2 218 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 AK8Q96MA6 479 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 DRC1Q96MC2 740 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 S1PR5Q9H228 398 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 STK39Q9UEW8 545 aa12.31□□□□□ -0.44
TRAPPC4-204ENST00000524797 MTCL1Q9Y4B5 1905 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 PI4K2BG5E9Z4 385 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 EFEMP2O95967 443 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 GUCY2CP25092 1073 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 GRIK3Q13003 919 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 RESTQ13127 1097 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 SUSD6Q92537 303 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 CDK5RAP3Q96JB5 506 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 POP1Q99575 1024 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 ADPGKQ9BRR6 497 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 SNTG2Q9NY99 539 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 HCFC2Q9Y5Z7 792 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 DENND4AQ7Z401 1863 aa12.3□□□□□ -0.44
TRAPPC4-204ENST00000524797 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 K7ERI5 159 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 RECQL4O94761 1208 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 HOXB8P17481 243 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 SLC12A3P55017 1021 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 GRIN1Q05586 938 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 ATF7IP2Q5U623 682 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 RNF168Q8IYW5 571 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 RPS6KC1Q96S38 1066 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 COLEC11Q9BWP8 271 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 APOL5Q9BWW9 433 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 C1QTNF1Q9BXJ1 281 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 ARHGAP28Q9P2N2 729 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 F8W810 466 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 PTGESO14684 152 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 LILRB3O75022 631 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 SOD2P04179 222 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 SYT1P21579 422 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 DMP1Q13316 513 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 TAS1R1Q7RTX1 841 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 KLHL5Q96PQ7 755 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 CXCL16Q9H2A7 254 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 C17orf75Q9HAS0 396 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 TNFSF13BQ9Y275 285 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 CLIC4Q9Y696 253 aa12.29□□□□□ -0.44
TRAPPC4-204ENST00000524797 VWA8A3KMH1 1905 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 LOC730098B7Z3J9 87 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 SLC16A4O15374 487 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 NR1I2O75469 434 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 EPCAMP16422 314 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 LONP1P36776 959 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 UBA7P41226 1012 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 PTPAQ15257 358 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 APBB1IPQ7Z5R6 666 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-204ENST00000524797 TMEM87AQ8NBN3 555 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms