RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 ADPGKQ9BRR6 497 aa9.81□□□□□ -0.84
CTNNA1-240ENST00000523912 HERC2P3Q9BVR0 1158 aa9.81□□□□□ -0.84
CTNNA1-240ENST00000523912 COLEC11Q9BWP8 271 aa9.81□□□□□ -0.84
CTNNA1-240ENST00000523912 EIF2AQ9BY44 585 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-240ENST00000523912 PHLPP2Q6ZVD8 1323 aa9.81□□□□□ -0.84
CTNNA1-240ENST00000523912 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 PROB1E7EW31 1015 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 LAD1O00515 517 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 NRP1O14786 923 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 MED24O75448 989 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 NPTXRO95502 500 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 CYP11B2P19099 503 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 SP100P23497 879 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 CCT6AP40227 531 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 NAMPTP43490 491 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 GLUD2P49448 558 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 FXR2P51116 673 aaKnown RBP eCLIP9.8□□□□□ -0.842e-14■■■□□ 15
CTNNA1-240ENST00000523912 SCNN1GP51170 649 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 GRIK3Q13003 919 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 PRPF4BQ13523 1007 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 AMHR2Q16671 573 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 CCDC149Q6ZUS6 474 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 COLGALT2Q8IYK4 626 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 KIFAP3Q92845 792 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 NXF3Q9H4D5 531 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 GPRC5CQ9NQ84 441 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 PARP2Q9UGN5 583 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 HES2Q9Y543 173 aa9.8□□□□□ -0.84
CTNNA1-240ENST00000523912 C2CD2LO14523 706 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 B4GALT5O43286 388 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 DDHD2O94830 711 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 GLUD1P00367 558 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 PRKCBP05771 671 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 EPCAMP16422 314 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 LIG1P18858 919 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 EFNA5P52803 228 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 DSC1Q08554 894 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 FAM187BQ17R55 369 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 DCAF4L1Q3SXM0 396 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 KRT79Q5XKE5 535 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 PLCD3Q8N3E9 789 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 SNX29Q8TEQ0 813 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 SLC22A17Q8WUG5 538 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 ACSF2Q96CM8 615 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 KLHL5Q96PQ7 755 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 VN1R3Q9BXE9 311 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 POMKQ9H5K3 350 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 MARCH5Q9NX47 278 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 LRWD1Q9UFC0 647 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 C5orf42Q9H799 3197 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 SF3B1O75533 1304 aaKnown RBP eCLIP9.79□□□□□ -0.848e-6■■■■■ 107
CTNNA1-240ENST00000523912 KMT2EQ8IZD2 1858 aa9.79□□□□□ -0.84
CTNNA1-240ENST00000523912 RIF1Q5UIP0 2472 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 H3BQV1 296 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 ACKR2O00590 384 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 B4GALT3O60512 393 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 TADA2AO75478 443 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 CNPP09543 421 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 AKAP5P24588 427 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.845e-9■■■□□ 17.1
CTNNA1-240ENST00000523912 MCM2P49736 904 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 CLCN4P51793 760 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 AFF1P51825 1210 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 DMP1Q13316 513 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 PDIA5Q14554 519 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 USP41Q3LFD5 358 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 C8orf34Q49A92 452 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 MCTP1Q6DN14 999 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 TMC5Q6UXY8 1006 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 CYP26C1Q6V0L0 522 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 OTOP3Q7RTS5 596 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 STAMQ92783 540 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 BHMT2Q9H2M3 363 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 FZD8Q9H461 694 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 PDZD7Q9H5P4 517 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 FAM186AA6NE01 2351 aa9.78□□□□□ -0.84
CTNNA1-240ENST00000523912 A0A087WWV3 80 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 C2CD4DB7Z1M9 353 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 GFRA3O60609 400 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 C1RP00736 705 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 WEE2P0C1S8 567 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 PRPHP41219 470 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 DSG1Q02413 1049 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 ELAVL2Q12926 359 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 PTGDRQ13258 359 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 TUSC3Q13454 348 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 HSP90AA2PQ14568 343 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 RILPL1Q5EBL4 403 aa9.77□□□□□ -0.85
CTNNA1-240ENST00000523912 FUT10Q6P4F1 479 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms