RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 ATP2B1P20020 1258 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 MCM7P33993 719 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 CA8P35219 290 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 MLH1P40692 756 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 OR1G1P47890 313 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 RBM25P49756 843 aaKnown RBP14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 HMGN5P82970 282 aaKnown RBP14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 OTOP3Q7RTS5 596 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 PRSS33Q8NF86 280 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 ERMNQ8TAM6 284 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 C8orf76Q96K31 380 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 ZFP42Q96MM3 310 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 POLR3FQ9H1D9 316 aaPredicted RBP14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 LIMD1Q9UGP4 676 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 HES2Q9Y543 173 aa14.01□□□□□ -0.17
TOP1MT-217ENST00000523417 ZDBF2Q9HCK1 2354 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 A0A087WWV3 80 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 TEX28O15482 410 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 B4GALT5O43286 388 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 BRD1O95696 1058 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 URODP06132 367 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 ADH1AP07327 375 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 WEE2P0C1S8 567 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 GLUD2P49448 558 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 MRE11P49959 708 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
TOP1MT-217ENST00000523417 SCNN1GP51170 649 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 TCF15Q12870 199 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 GRIK3Q13003 919 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 LILRA6Q6PI73 481 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 ELMSAN1Q6PJG2 1045 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 TMC5Q6UXY8 1006 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 TDRD5Q8NAT2 981 aaKnown RBP14□□□□□ -0.17
TOP1MT-217ENST00000523417 ACSF2Q96CM8 615 aaPredicted RBP14□□□□□ -0.17
TOP1MT-217ENST00000523417 CCDC43Q96MW1 224 aaKnown RBP14□□□□□ -0.17
TOP1MT-217ENST00000523417 TRIM6Q9C030 488 aaPredicted RBP14□□□□□ -0.17
TOP1MT-217ENST00000523417 C2orf40Q9H1Z8 148 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 NXF3Q9H4D5 531 aaKnown RBP14□□□□□ -0.17
TOP1MT-217ENST00000523417 PLEKHA4Q9H4M7 779 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
TOP1MT-217ENST00000523417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14□□□□□ -0.17
TOP1MT-217ENST00000523417 STK24Q9Y6E0 443 aa14□□□□□ -0.17
TOP1MT-217ENST00000523417 ACKR2O00590 384 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 USO1O60763 962 aaKnown RBP13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 OR52Z1P0C646 297 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 AKAP5P24588 427 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 U2AF2P26368 475 aaKnown RBP eCLIP13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 ZNF174Q15697 407 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 USP41Q3LFD5 358 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 PADI6Q6TGC4 694 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 ZBTB33Q86T24 672 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 NOSTRINQ8IVI9 506 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 ZBTB8OSQ8IWT0 167 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 KIF2CQ99661 725 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 GPR62Q9BZJ7 368 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 WDR6Q9NNW5 1121 aaKnown RBP13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 GPRC5CQ9NQ84 441 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 ADAM28Q9UKQ2 775 aa13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 PRG3Q9Y2Y8 225 aaPredicted RBP13.99□□□□□ -0.17
TOP1MT-217ENST00000523417 LRRIQ4A6NIV6 560 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 N4BP3O15049 544 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 NPTXRO95502 500 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 SSBP05455 408 aaKnown RBP eCLIP13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 NAMPTP43490 491 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 EFNA5P52803 228 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 CREMQ03060 361 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 TUSC3Q13454 348 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 CCDC83Q8IWF9 413 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 IGSF9Q9P2J2 1179 aa13.98□□□□□ -0.17
TOP1MT-217ENST00000523417 CCDC195A0A1B0GUA6 201 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 GLUD1P00367 558 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 CLCN5P51795 746 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 VCPP55072 806 aaKnown RBP13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 GUCY1B3Q02153 619 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 NAB2Q15742 525 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 MAPK6Q16659 721 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 TTC38Q5R3I4 469 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 HAUS3Q68CZ6 603 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 FUT10Q6P4F1 479 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 FEZF2Q8TBJ5 459 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 BSNDQ8WZ55 320 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 NXPE3Q969Y0 559 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 PDZD7Q9H5P4 517 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 MAN1C1Q9NR34 630 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 ZDHHC7Q9NXF8 308 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 PARP2Q9UGN5 583 aa13.97□□□□□ -0.17
TOP1MT-217ENST00000523417 ARHGEF35A5YM69 484 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 F8W810 466 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 LAD1O00515 517 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 C2CD2LO14523 706 aa13.96□□□□□ -0.17
TOP1MT-217ENST00000523417 TADA2AO75478 443 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms