RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ZSCAN16Q9H4T2 348 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC9-211ENST00000521700 C17orf75Q9HAS0 396 aa19.7■□□□□ 0.74
TRAPPC9-211ENST00000521700 KMT5AQ9NQR1 393 aa19.7■□□□□ 0.74
TRAPPC9-211ENST00000521700 PARP2Q9UGN5 583 aa19.7■□□□□ 0.74
TRAPPC9-211ENST00000521700 NPHP3-ACAD11A0A0J9YXS1 232 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 C2orf71A6NGG8 1288 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 CXCL14O95715 111 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 MARCKSP29966 332 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 CEBPZQ03701 1054 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 DSC1Q08554 894 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 KCNC3Q14003 757 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 SMC1AQ14683 1233 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 KARSQ15046 597 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 USP49Q70CQ1 688 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 FAM178BQ8IXR5 827 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 VN1R3Q9BXE9 311 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 ZBP1Q9H171 429 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 TMEM134Q9H6X4 195 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 BLOC1S4Q9NUP1 217 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 SNTG2Q9NY99 539 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 KCND2Q9NZV8 630 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 ARHGAP28Q9P2N2 729 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 CD207Q9UJ71 328 aa19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 FBXO2Q9UK22 296 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 SRPRBQ9Y5M8 271 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-211ENST00000521700 TDRD15B5MCY1 1934 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 MBTPS2O43462 519 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 PLCG1P19174 1290 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 OR1G1P47890 313 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 SPECC1Q5M775 1068 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 ATF7IP2Q5U623 682 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 TAS1R3Q7RTX0 852 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 AUTS2Q8WXX7 1259 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 EPSTI1Q96J88 318 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 USP28Q96RU2 1077 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 ADPGKQ9BRR6 497 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 CCSER1Q9C0I3 900 aa19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 BARX2Q9UMQ3 279 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC9-211ENST00000521700 MYH11P35749 1972 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 SLC16A4O15374 487 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 CTSAP10619 480 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 PLS3P13797 630 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 CACNB1Q02641 598 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 COASYQ13057 564 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 DHX8Q14562 1220 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 BMS1Q14692 1282 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 TMEM184AQ6ZMB5 413 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 SPIRE2Q8WWL2 714 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 CLIC6Q96NY7 704 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 ACO2Q99798 780 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 CXCL16Q9H2A7 254 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 CD320Q9NPF0 282 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 MARCH5Q9NX47 278 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 FAM50BQ9Y247 325 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 TNFSF13BQ9Y275 285 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 PRG3Q9Y2Y8 225 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 PHLPP2Q6ZVD8 1323 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 ZMYM2Q9UBW7 1377 aa19.67■□□□□ 0.74
TRAPPC9-211ENST00000521700 FSD2A1L4K1 749 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 GRIK3Q13003 919 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 SMAD4Q13485 552 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 MCM6Q14566 821 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 SLC39A14Q15043 492 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 DCAF4L1Q3SXM0 396 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 GPBP1Q86WP2 473 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 RASSF8Q8NHQ8 419 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 RAD54LQ92698 747 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 TARS2Q9BW92 718 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 MRPL4Q9BYD3 311 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 KCNG1Q9UIX4 513 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 IRAK3Q9Y616 596 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 MUC3AQ02505 3323 aa19.66■□□□□ 0.74
TRAPPC9-211ENST00000521700 BDP1A6H8Y1 2624 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 F8W810 466 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 CLASP2O75122 1294 aaKnown RBP19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 RECQL4O94761 1208 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 CA8P35219 290 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 SMTNP53814 917 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 SMAD2Q15796 467 aaKnown RBP19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 LLGL2Q6P1M3 1020 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 SMRP1Q8NCR6 262 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 TMEM161BQ8NDZ6 487 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 RPS6KC1Q96S38 1066 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 REEP2Q9BRK0 252 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 COLEC11Q9BWP8 271 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 PTPRHQ9HD43 1115 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 DAXXQ9UER7 740 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 GDAQ9Y2T3 454 aa19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 MORC2Q9Y6X9 1032 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC9-211ENST00000521700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 PTGESO14684 152 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 NR1I2O75469 434 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 EFEMP2O95967 443 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 DDIT3P35638 169 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 GIT2Q14161 759 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 TAS1R1Q7RTX1 841 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 RABGGTAQ92696 567 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 CDT1Q9H211 546 aa19.64■□□□□ 0.73
TRAPPC9-211ENST00000521700 LARSQ9P2J5 1176 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms