RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 FLCNQ8NFG4 579 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 TMEM143Q96AN5 459 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 SH2D3AQ9BRG2 576 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 DDX23Q9BUQ8 820 aaKnown RBP9.49□□□□□ -0.89
SPARC-204ENST00000521569 COLEC11Q9BWP8 271 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 GBP3Q9H0R5 595 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 ANKEF1Q9NU02 776 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 MYH9P35579 1960 aaKnown RBP9.49□□□□□ -0.89
SPARC-204ENST00000521569 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 MYO10Q9HD67 2058 aa9.49□□□□□ -0.89
SPARC-204ENST00000521569 CPLX1O14810 134 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 TGM5O43548 720 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 ZMYND10O75800 440 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 CDKL5O76039 1030 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 ERLIN2O94905 339 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 POMCP01189 267 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 XBP1P17861 261 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 MBTD1Q05BQ5 628 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 GRIK3Q13003 919 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 TFDP1Q14186 410 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 LONRF3Q496Y0 759 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 MAMSTRQ6ZN01 415 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 C1orf210Q8IVY1 113 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 SMG7Q92540 1137 aaKnown RBP9.48□□□□□ -0.89
SPARC-204ENST00000521569 SHDQ96IW2 340 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 MYADMQ96S97 322 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 GAD1Q99259 594 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 MTRQ99707 1265 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 EIF2AQ9BY44 585 aaKnown RBP9.48□□□□□ -0.89
SPARC-204ENST00000521569 GPR62Q9BZJ7 368 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 XPNPEP1Q9NQW7 623 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 MIOSQ9NXC5 875 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 ADAM28Q9UKQ2 775 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 SIT1Q9Y3P8 196 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 OTOGLQ3ZCN5 2332 aa9.48□□□□□ -0.89
SPARC-204ENST00000521569 CCDC194A0A1B0GVG4 234 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 NARSO43776 548 aaKnown RBP9.47□□□□□ -0.89
SPARC-204ENST00000521569 RFPL2O75678 378 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 ARF4P18085 180 aaPredicted RBP9.47□□□□□ -0.89
SPARC-204ENST00000521569 MAGEA9P43362 315 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 OR1G1P47890 313 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 CDCA2Q69YH5 1023 aaPredicted RBP9.47□□□□□ -0.89
SPARC-204ENST00000521569 FUT10Q6P4F1 479 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 PDXDC1Q6P996 788 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 SLC27A1Q6PCB7 646 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 NELL1Q92832 810 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 TNFRSF25Q93038 417 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 TBC1D17Q9HA65 648 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 AVENQ9NQS1 362 aaPredicted RBP9.47□□□□□ -0.89
SPARC-204ENST00000521569 ARHGEF3Q9NR81 526 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 DLL3Q9NYJ7 618 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 RGL1Q9NZL6 768 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 FBXW11Q9UKB1 542 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 KCNH3Q9ULD8 1083 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 PRG3Q9Y2Y8 225 aaPredicted RBP9.47□□□□□ -0.89
SPARC-204ENST00000521569 DENND4AQ7Z401 1863 aa9.47□□□□□ -0.89
SPARC-204ENST00000521569 SPDYE4A6NLX3 237 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 CCNT1O60563 726 aaKnown RBP9.46□□□□□ -0.9
SPARC-204ENST00000521569 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.9
SPARC-204ENST00000521569 SSBP05455 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPARC-204ENST00000521569 GBP2P32456 591 aaPredicted RBP9.46□□□□□ -0.9
SPARC-204ENST00000521569 MLH1P40692 756 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.9
SPARC-204ENST00000521569 SCNN1GP51170 649 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 IRX6P78412 446 aaPredicted RBP9.46□□□□□ -0.9
SPARC-204ENST00000521569 PRKCQQ04759 706 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 ELAVL2Q12926 359 aaKnown RBP9.46□□□□□ -0.9
SPARC-204ENST00000521569 MTSS1LQ765P7 747 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 PJA1Q8NG27 643 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 RSAD2Q8WXG1 361 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 DYDC2Q96IM9 177 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 CLSTN3Q9BQT9 956 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 TTPALQ9BTX7 342 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 FZD8Q9H461 694 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 FBXO4Q9UKT5 387 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 CDH7Q9ULB5 785 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 GPR179Q6PRD1 2367 aa9.46□□□□□ -0.9
SPARC-204ENST00000521569 SF3B1O75533 1304 aaKnown RBP eCLIP9.46□□□□□ -0.93e-6■■■■■ 137.9
SPARC-204ENST00000521569 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 C2CD2LO14523 706 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 ZBTB39O15060 712 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 PFKFB2O60825 505 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 CFHP08603 1231 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 SP9P0CG40 484 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 GLRA2P23416 452 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 RARRES1P49788 294 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 PFKPQ01813 784 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 TUSC3Q13454 348 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 CAPSQ13938 189 aa9.45□□□□□ -0.9
SPARC-204ENST00000521569 HSP90AA2PQ14568 343 aaPredicted RBP9.45□□□□□ -0.9
SPARC-204ENST00000521569 PUM1Q14671 1186 aaKnown RBP eCLIP9.45□□□□□ -0.9
SPARC-204ENST00000521569 NAB2Q15742 525 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms