RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CLSTN1O94985 981 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 PCDH8O95206 1070 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 FKBP9O95302 570 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 PEX11BO96011 259 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 HNRNPLP14866 589 aaKnown RBP eCLIP4.41□□□□□ -1.7
VPS13B-209ENST00000521559 STAT3P40763 770 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 ABHD18Q0P651 414 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 SAFB2Q14151 953 aaKnown RBP eCLIP4.41□□□□□ -1.7
VPS13B-209ENST00000521559 ELAVL1Q15717 326 aaKnown RBP4.41□□□□□ -1.7
VPS13B-209ENST00000521559 PLEKHG4Q58EX7 1191 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 FKBP15Q5T1M5 1219 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 UNQ6494/PRO21346Q6UXR6 183 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 FKBP9P1Q75LS8 142 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 TMPRSS6Q8IU80 811 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 UNC5BQ8IZJ1 945 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 Q8N1X5 172 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 LEO1Q8WVC0 666 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-209ENST00000521559 USP7Q93009 1102 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 NCDNQ9UBB6 729 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 DEPDC5O75140 1603 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 MADDQ8WXG6 1647 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 GCC2Q8IWJ2 1684 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 DHX57Q6P158 1386 aaKnown RBP4.4□□□□□ -1.7
VPS13B-209ENST00000521559 UHRF1BP1Q6BDS2 1440 aa4.4□□□□□ -1.7
VPS13B-209ENST00000521559 GOLGA6L6A8MZA4 724 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 NPIPB8E9PQR5 432 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 ELL2O00472 640 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 PDE8AO60658 829 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 ZNF202O95125 648 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 MYCLP1P12525 358 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 MAN2A2P49641 1150 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 HMGA2P52926 109 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 HSPA2P54652 639 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 ADAM8P78325 824 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 TUBA3CQ13748 450 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 SPIDRQ14159 915 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 DHCR24Q15392 516 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 TERF2Q15554 542 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 DDB1Q16531 1140 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 TUBA3EQ6PEY2 450 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 DDX46Q7L014 1031 aaKnown RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 IL17DQ8TAD2 202 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 PPP1R14CQ8TAE6 165 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 GAB3Q8WWW8 586 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 ZNF496Q96IT1 587 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 SPTLC3Q9NUV7 552 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 HECAQ9UBI9 543 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 USP18Q9UMW8 372 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 TMA7Q9Y2S6 64 aaKnown RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 NOC2LQ9Y3T9 749 aaKnown RBP4.4□□□□□ -1.71
VPS13B-209ENST00000521559 NUMBLQ9Y6R0 609 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 NLRP1Q9C000 1473 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 EFCAB6Q5THR3 1501 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 SPATA31D1Q6ZQQ2 1576 aa4.4□□□□□ -1.71
VPS13B-209ENST00000521559 IQGAP3Q86VI3 1631 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 GSG1L2A8MUP6 293 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 PLSCR1O15162 318 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ZEB2O60315 1214 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ULK1O75385 1050 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 PFKMP08237 780 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 GAAP10253 952 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 GNAT2P19087 354 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ADCYAP1R1P41586 468 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 RRP1BQ14684 758 aaKnown RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ACAP1Q15027 740 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 SEPT7Q16181 437 aaKnown RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ATP13A4Q4VNC1 1196 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 SPTY2D1Q68D10 685 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 LMBR1LQ6UX01 489 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 APBB1IPQ7Z5R6 666 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 GLB1L2Q8IW92 636 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 SLC5A5Q92911 643 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 PAWRQ96IZ0 340 aaKnown RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 ZNF512Q96ME7 567 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 SIN3AQ96ST3 1273 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 MRIQ9BWK5 157 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 SCAND2PQ9GZW5 306 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-209ENST00000521559 EMC7Q9NPA0 242 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 TBX22Q9Y458 520 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 EID1Q9Y6B2 187 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 RPGRIP1LQ68CZ1 1315 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 CLSPNQ9HAW4 1339 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 TMEM2Q9UHN6 1383 aa4.39□□□□□ -1.71
VPS13B-209ENST00000521559 MROH2AA6NES4 1674 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 TET3O43151 1660 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 CLTCQ00610 1675 aaKnown RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 RIMS1Q86UR5 1692 aaKnown RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 CCDC144AA2RUR9 1427 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 A2ML1A8K2U0 1454 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 A0A087X0B3 334 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 A0A0A6YYK5 440 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-209ENST00000521559 TLDC2A0PJX2 215 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 KDM1AO60341 852 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 ALDH1A2O94788 518 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 MAKP20794 623 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 GYS2P54840 703 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 WNT3AP56704 352 aa4.38□□□□□ -1.71
VPS13B-209ENST00000521559 TGFB2P61812 414 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms