RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 HCFC2Q9Y5Z7 792 aa18.81■□□□□ 0.6
SQLE-205ENST00000521232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.8■□□□□ 0.6
SQLE-205ENST00000521232 K7ERI5 159 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 LILRB3O75022 631 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 EFEMP2O95967 443 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 PDCP20941 246 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 OR1G1P47890 313 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 SYT2Q8N9I0 419 aaPredicted RBP18.8■□□□□ 0.6
SQLE-205ENST00000521232 AK8Q96MA6 479 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 RUSC1Q9BVN2 902 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 TIPINQ9BVW5 301 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 C17orf75Q9HAS0 396 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 MARCH5Q9NX47 278 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 USP20Q9Y2K6 914 aa18.8■□□□□ 0.6
SQLE-205ENST00000521232 SLC26A4O43511 780 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 HIP1RO75146 1068 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 NR1I2O75469 434 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 BMP15O95972 392 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 LIG1P18858 919 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 GUCY2CP25092 1073 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 CA8P35219 290 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 NPTX2P47972 431 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 PEX3P56589 373 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 MAPK7Q13164 816 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
SQLE-205ENST00000521232 NT5DC1Q5TFE4 455 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 RNF168Q8IYW5 571 aaPredicted RBP18.79■□□□□ 0.6
SQLE-205ENST00000521232 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
SQLE-205ENST00000521232 DRC1Q96MC2 740 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 ADPGKQ9BRR6 497 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 NTPCRQ9BSD7 190 aaKnown RBP18.79■□□□□ 0.6
SQLE-205ENST00000521232 TMEM134Q9H6X4 195 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 KLK14Q9P0G3 267 aa18.79■□□□□ 0.6
SQLE-205ENST00000521232 PRG3Q9Y2Y8 225 aaPredicted RBP18.79■□□□□ 0.6
SQLE-205ENST00000521232 CCDC169A6NNP5 214 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 SOD2P04179 222 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 ALADP13716 330 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 GRIK3Q13003 919 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 TMEM132AQ24JP5 1023 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 TMEM119Q4V9L6 283 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 EEF1DP3Q658K8 133 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 TMEM87AQ8NBN3 555 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 SLC22A17Q8WUG5 538 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 COLEC11Q9BWP8 271 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 PHF7Q9BWX1 381 aaPredicted RBP18.78■□□□□ 0.6
SQLE-205ENST00000521232 SNTG2Q9NY99 539 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 ARHGAP28Q9P2N2 729 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 KCNG1Q9UIX4 513 aa18.78■□□□□ 0.6
SQLE-205ENST00000521232 RBM19Q9Y4C8 960 aaKnown RBP18.78■□□□□ 0.6
SQLE-205ENST00000521232 MYH11P35749 1972 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 VPS37CA5D8V6 355 aaPredicted RBP18.77■□□□□ 0.6
SQLE-205ENST00000521232 LOC730098B7Z3J9 87 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 GPR37L1O60883 481 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 DMP1Q13316 513 aaPredicted RBP18.77■□□□□ 0.6
SQLE-205ENST00000521232 CBX2Q14781 532 aaPredicted RBP18.77■□□□□ 0.6
SQLE-205ENST00000521232 SF3A1Q15459 793 aaKnown RBP18.77■□□□□ 0.6
SQLE-205ENST00000521232 DCAF4L1Q3SXM0 396 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 TPRNQ4KMQ1 711 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 ATF7IP2Q5U623 682 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 TAS1R1Q7RTX1 841 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 CABP7Q86V35 215 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 PPFIBP1Q86W92 1011 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 CDK5RAP3Q96JB5 506 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 KLHL5Q96PQ7 755 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 RPS6KC1Q96S38 1066 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 PLIN2Q99541 437 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 HERC2P3Q9BVR0 1158 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 KMT5AQ9NQR1 393 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 MRPL17Q9NRX2 175 aaKnown RBP18.77■□□□□ 0.6
SQLE-205ENST00000521232 KCND2Q9NZV8 630 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 TNFSF13BQ9Y275 285 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 SSX2IPQ9Y2D8 614 aa18.77■□□□□ 0.6
SQLE-205ENST00000521232 PHLPP2Q6ZVD8 1323 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 SFI1A8K8P3 1242 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 CNPP09543 421 aaKnown RBP18.76■□□□□ 0.59
SQLE-205ENST00000521232 PLA2G4BP0C869 781 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 SYT1P21579 422 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
SQLE-205ENST00000521232 UBA7P41226 1012 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 ITIH3Q06033 890 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 KIAA0319Q5VV43 1072 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 TAS1R3Q7RTX0 852 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 ACO2Q99798 780 aaKnown RBP18.76■□□□□ 0.59
SQLE-205ENST00000521232 EMILIN2Q9BXX0 1053 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 ADAM7Q9H2U9 754 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 PTPRHQ9HD43 1115 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 C11orf16Q9NQ32 467 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 CHST7Q9NS84 486 aa18.76■□□□□ 0.59
SQLE-205ENST00000521232 TRIP11Q15643 1979 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 F8W810 466 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 PTGESO14684 152 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 DCXO43602 365 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 RECQL4O94761 1208 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 SSBP05455 408 aaKnown RBP eCLIP18.75■□□□□ 0.59
SQLE-205ENST00000521232 THP07101 528 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 EPCAMP16422 314 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 TUSC3Q13454 348 aa18.75■□□□□ 0.59
SQLE-205ENST00000521232 TMEM31Q5JXX7 168 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms