RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SPATA33Q96N06 139 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
CLK4-206ENST00000520878 FIZ1Q96SL8 496 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 CELF4Q9BZC1 486 aaKnown RBP12.23□□□□□ -0.45
CLK4-206ENST00000520878 SART1O43290 800 aaKnown RBP12.23□□□□□ -0.45
CLK4-206ENST00000520878 OPA1O60313 960 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 EPHB4P54760 987 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 GTF2BQ00403 316 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 XRRA1Q6P2D8 792 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 PARD3BQ8TEW8 1205 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 HNRNPLLQ8WVV9 542 aaKnown RBP12.23□□□□□ -0.45
CLK4-206ENST00000520878 CPA5Q8WXQ8 436 aa12.23□□□□□ -0.45
CLK4-206ENST00000520878 MAGOHBQ96A72 148 aaKnown RBP12.23□□□□□ -0.45
CLK4-206ENST00000520878 CDK5RAP2Q96SN8 1893 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 OATP04181 439 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 ITGA4P13612 1032 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 SNX1Q13596 522 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 NEDD9Q14511 834 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 ZNF662Q6ZS27 426 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 ZBTB8OSQ8IWT0 167 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 TRAPPC12Q8WVT3 735 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 ADARB2Q9NS39 739 aaKnown RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 CNOT8Q9UFF9 292 aaKnown RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 H0YCG3 227 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 LCA5LO95447 670 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 KCNA2P16389 499 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 NSFP46459 744 aaKnown RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 PPP1R7Q15435 360 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 TRADDQ15628 312 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 WDR93Q6P2C0 686 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 MMGT1Q8N4V1 131 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 NUP85Q9BW27 656 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 SYNCQ9H7C4 482 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 BTBD7Q9P203 1132 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 RSPH14Q9UHP6 348 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 ALG6Q9Y672 507 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 IGSF9BQ9UPX0 1349 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 TARSL2A2RTX5 802 aaKnown RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 THAP12O43422 761 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 TMOD1P28289 359 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 SP2Q02086 613 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 FAM71BQ8TC56 605 aa12.22□□□□□ -0.45
CLK4-206ENST00000520878 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■■■□□ 15
CLK4-206ENST00000520878 ASCC2Q9H1I8 757 aaPredicted RBP12.22□□□□□ -0.45
CLK4-206ENST00000520878 RPTORQ8N122 1335 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 PRLRP16471 622 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 MAPK4P31152 587 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 MAP3K10Q02779 954 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 PRPF31Q8WWY3 499 aaKnown RBP12.21□□□□□ -0.45
CLK4-206ENST00000520878 SEMA4DQ92854 862 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 CCDC114Q96M63 670 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 MMP19Q99542 508 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 TIPINQ9BVW5 301 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 TMEM8AQ9HCN3 771 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 ANAPC7Q9UJX3 599 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 COL4A5P29400 1685 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 TTI1O43156 1089 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 TMEM191BP0C7N4 346 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 CYP2C8P10632 490 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 OSBPP22059 807 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 ADSSP30520 456 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 PRKCIP41743 596 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
CLK4-206ENST00000520878 NLRP11P59045 1033 aaKnown RBP12.21□□□□□ -0.45
CLK4-206ENST00000520878 COPS5Q92905 334 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 ZBTB10Q96DT7 871 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
CLK4-206ENST00000520878 C11orf70Q9BRQ4 267 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 AKT3Q9Y243 479 aa12.21□□□□□ -0.45
CLK4-206ENST00000520878 MYO1FO00160 1098 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 DAPK3O43293 454 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 HLA-DRAP01903 254 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 UBA1P22314 1058 aaKnown RBP12.21□□□□□ -0.46
CLK4-206ENST00000520878 PLTPP55058 493 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 GJC2Q5T442 439 aaPredicted RBP12.21□□□□□ -0.46
CLK4-206ENST00000520878 DPP9Q86TI2 863 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 ANKRD13AQ8IZ07 590 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 ZNF564Q8TBZ8 553 aaPredicted RBP12.21□□□□□ -0.46
CLK4-206ENST00000520878 NAP1L3Q99457 506 aaPredicted RBP12.21□□□□□ -0.46
CLK4-206ENST00000520878 MED4Q9NPJ6 270 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 MTUS1Q9ULD2 1270 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 HPCAL4Q9UM19 191 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 PCDHGC5Q9Y5F6 944 aa12.21□□□□□ -0.46
CLK4-206ENST00000520878 TMEM253P0C7T8 217 aa12.2□□□□□ -0.46
CLK4-206ENST00000520878 AADACL2Q6P093 401 aa12.2□□□□□ -0.46
CLK4-206ENST00000520878 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
CLK4-206ENST00000520878 MAP4K3Q8IVH8 894 aa12.2□□□□□ -0.46
CLK4-206ENST00000520878 RHOT2Q8IXI1 618 aa12.2□□□□□ -0.46
CLK4-206ENST00000520878 RDM1Q8NG50 284 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms