RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 VPS37DQ86XT2 251 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 SMYD4Q8IYR2 804 aaPredicted RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 C12orf50Q8NA57 414 aaPredicted RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 NPLOC4Q8TAT6 608 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 MAN1C1Q9NR34 630 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 PCDHGA11Q9Y5H2 935 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 ARHGAP5Q13017 1502 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 MST1RQ04912 1400 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 PDS5AQ29RF7 1337 aaKnown RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 TLDC2A0PJX2 215 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 GRID2IPA4D2P6 1211 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 ZBTB11O95625 1053 aaPredicted RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 TNNC1P63316 161 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 KCNMA1Q12791 1236 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 BRSK2Q8IWQ3 736 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 EME1Q96AY2 570 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 XAB2Q9HCS7 855 aaKnown RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 THAP1Q9NVV9 213 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 IKBKGQ9Y6K9 419 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 HAT1O14929 419 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 AQP9O43315 295 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 ANXA13P27216 316 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 PTPN4P29074 926 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
CPEB4-208ENST00000520867 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 LILRB4Q8NHJ6 448 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 MGARPQ8TDB4 240 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 PEX13Q92968 403 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
CPEB4-208ENST00000520867 AIFM3Q96NN9 605 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 BOLA2Q9H3K6 86 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 AGPAT5Q9NUQ2 364 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 HMGXB4Q9UGU5 601 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 TMEM59LQ9UK28 342 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 CTNND2Q9UQB3 1225 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 PPP1R3GB7ZBB8 358 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 ADSLP30566 484 aaPredicted RBP13.61□□□□□ -0.23
CPEB4-208ENST00000520867 PHKA2P46019 1235 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 PDE1CQ14123 709 aaPredicted RBP13.61□□□□□ -0.23
CPEB4-208ENST00000520867 KCNJ12Q14500 433 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 WTAPQ15007 396 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 DHRS4L2Q6PKH6 230 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 LZTR1Q8N653 840 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 C7orf57Q8NEG2 295 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 RNF41Q9H4P4 317 aaPredicted RBP13.61□□□□□ -0.23
CPEB4-208ENST00000520867 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 HPS5Q9UPZ3 1129 aa13.61□□□□□ -0.23
CPEB4-208ENST00000520867 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
CPEB4-208ENST00000520867 A0A1W2PQC6 194 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 ENPP3O14638 875 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 RGS16O15492 202 aaPredicted RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 SEC24DO94855 1032 aaPredicted RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 DNA2P51530 1060 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 THOP1P52888 689 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 VCPP55072 806 aaKnown RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 KCNC4Q03721 635 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 STK11Q15831 433 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TJAP1Q5JTD0 557 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 ZNF746Q6NUN9 644 aaPredicted RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 CENPSQ8N2Z9 138 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 SGCDQ92629 289 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 DPF3Q92784 378 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 CALN1Q9BXU9 219 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 MAD1L1Q9Y6D9 718 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TSPY2A6NKD2 308 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 FAM25EA8MYX2 175 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 NDC80O14777 642 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 DAPK3O43293 454 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TRPA1O75762 1119 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 ESRRAP11474 423 aaPredicted RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 PCP11498 1178 aaKnown RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 TSPY1Q01534 308 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 GBE1Q04446 702 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 ACAP1Q15027 740 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 DCLRE1AQ6PJP8 1040 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 C4orf22Q6V702 233 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 MTMR8Q96EF0 704 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 SNF8Q96H20 258 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 ACAP3Q96P50 834 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 NLRC4Q9NPP4 1024 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 DDX56Q9NY93 547 aaKnown RBP13.6□□□□□ -0.23
CPEB4-208ENST00000520867 STXBP5LQ9Y2K9 1186 aa13.6□□□□□ -0.23
CPEB4-208ENST00000520867 FAM208AQ9UK61 1670 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms