RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ECHDC2Q86YB7 292 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 P2RX5Q93086 422 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 TOP1MTQ969P6 601 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 CCDC51Q96ER9 411 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 DHTKD1Q96HY7 919 aaPredicted RBP16.76■□□□□ 0.27
LSM1-203ENST00000520755 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 EIF2AQ9BY44 585 aaKnown RBP16.76■□□□□ 0.27
LSM1-203ENST00000520755 TRIM6Q9C030 488 aaPredicted RBP16.76■□□□□ 0.27
LSM1-203ENST00000520755 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 PCDHB7Q9Y5E2 793 aa16.76■□□□□ 0.27
LSM1-203ENST00000520755 A0A0U1RQF3 1178 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.75■□□□□ 0.27
LSM1-203ENST00000520755 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.75■□□□□ 0.27
LSM1-203ENST00000520755 PSMA7O14818 248 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
LSM1-203ENST00000520755 NPTXRO95502 500 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 STAG3L1P0CL83 205 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 PROZP22891 400 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 ADSSP30520 456 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 ABCD1P33897 745 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 PPP1R2P41236 205 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 RAB27AP51159 221 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 RABGGTBP53611 331 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 STX17P56962 302 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 STIM1Q13586 685 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 ANKRD40Q6AI12 368 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 GAS2L3Q86XJ1 694 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 NPAS4Q8IUM7 802 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 ACO2Q99798 780 aaKnown RBP16.75■□□□□ 0.27
LSM1-203ENST00000520755 DUSP9Q99956 384 aaKnown RBP16.75■□□□□ 0.27
LSM1-203ENST00000520755 GBP3Q9H0R5 595 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 TSPY26PQ9H489 355 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 AGPAT3Q9NRZ7 376 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 TYW1Q9NV66 732 aaKnown RBP16.75■□□□□ 0.27
LSM1-203ENST00000520755 TRAF3IP3Q9Y228 551 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 PCDHB2Q9Y5E7 798 aa16.75■□□□□ 0.27
LSM1-203ENST00000520755 LAMA2P24043 3122 aaKnown RBP16.74■□□□□ 0.27
LSM1-203ENST00000520755 PDXKO00764 312 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 KIF20AO95235 890 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 GJB5O95377 273 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 SKIP12755 728 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 ERCC5P28715 1186 aaPredicted RBP16.74■□□□□ 0.27
LSM1-203ENST00000520755 LIG4P49917 911 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 FAM189BP81408 668 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 ZBTB33Q86T24 672 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 ZC3H3Q8IXZ2 948 aaKnown RBP16.74■□□□□ 0.27
LSM1-203ENST00000520755 LPPQ93052 612 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 ZBTB45Q96K62 511 aaPredicted RBP16.74■□□□□ 0.27
LSM1-203ENST00000520755 ADPGKQ9BRR6 497 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 TCHPQ9BT92 498 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 TRAIPQ9BWF2 469 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 PTPRHQ9HD43 1115 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
LSM1-203ENST00000520755 TMEM161AQ9NX61 479 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 ANKFY1Q9P2R3 1169 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 RWDD2AQ9UIY3 292 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 TNFSF13BQ9Y275 285 aa16.74■□□□□ 0.27
LSM1-203ENST00000520755 TDRD15B5MCY1 1934 aaKnown RBP16.74■□□□□ 0.27
LSM1-203ENST00000520755 TLL1O43897 1013 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 HARSP12081 509 aaKnown RBP16.73■□□□□ 0.27
LSM1-203ENST00000520755 MYOGP15173 224 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 ATF7P17544 494 aaPredicted RBP16.73■□□□□ 0.27
LSM1-203ENST00000520755 PBX2P40425 430 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 MATR3P43243 847 aaKnown RBP eCLIP16.73■□□□□ 0.274e-6■■■□□ 17.4
LSM1-203ENST00000520755 NCAPHQ15003 741 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 IQCB1Q15051 598 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 ZNF568Q3ZCX4 644 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
LSM1-203ENST00000520755 FOXR2Q6PJQ5 311 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
LSM1-203ENST00000520755 SYCP3Q8IZU3 236 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 YME1L1Q96TA2 773 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 BPIFA3Q9BQP9 254 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 APOL6Q9BWW8 343 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 NXF3Q9H4D5 531 aaKnown RBP16.73■□□□□ 0.27
LSM1-203ENST00000520755 ELAC1Q9H777 363 aaKnown RBP16.73■□□□□ 0.27
LSM1-203ENST00000520755 EXOC7Q9UPT5 735 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 HES2Q9Y543 173 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 IPPQ9Y573 584 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 STYXL1Q9Y6J8 313 aa16.73■□□□□ 0.27
LSM1-203ENST00000520755 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 CLIC2O15247 247 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 FAM189A1O60320 539 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 ZNF623O75123 536 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 TOM1L1O75674 476 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 EOMESO95936 686 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 NR3C1P04150 777 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 FGFR1P11362 822 aa16.72■□□□□ 0.27
LSM1-203ENST00000520755 ZNF165P49910 485 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms