RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PIK3C3Q8NEB9 887 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 OR14C36Q8NHC7 312 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 NEU4Q8WWR8 484 aaPredicted RBP5.35□□□□□ -1.55
SQLE-204ENST00000520493 PAWRQ96IZ0 340 aaKnown RBP5.35□□□□□ -1.55
SQLE-204ENST00000520493 ANO3Q9BYT9 981 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 TCF7L1Q9HCS4 588 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 SLC52A1Q9NWF4 448 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.35□□□□□ -1.55
SQLE-204ENST00000520493 PPP2R3BQ9Y5P8 575 aa5.35□□□□□ -1.55
SQLE-204ENST00000520493 GABRDO14764 452 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 PPFIA4O75335 1185 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 RFPL1O75677 317 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 RECQL4O94761 1208 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 PRKD3O94806 890 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 U2AF1L5P0DN76 240 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 PTGS2P35354 604 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 ID4P47928 161 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 U2AF1Q01081 240 aaKnown RBP eCLIP5.34□□□□□ -1.55
SQLE-204ENST00000520493 MEF2AQ02078 507 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 INAVAQ3KP66 663 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 CCSAPQ6IQ19 270 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 CCDC62Q6P9F0 684 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 HDGFL2Q7Z4V5 671 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 CCAR1Q8IX12 1150 aaKnown RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 SYNE4Q8N205 404 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 GLB1L3Q8NCI6 653 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 PGBD4Q96DM1 585 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 MTMR8Q96EF0 704 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 IL17RAQ96F46 866 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 FAM193BQ96PV7 902 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 MNTQ99583 582 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 CPPED1Q9BRF8 314 aaPredicted RBP5.34□□□□□ -1.55
SQLE-204ENST00000520493 CDH19Q9H159 772 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 MMRN2Q9H8L6 949 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 PRSS50Q9UI38 385 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.55
SQLE-204ENST00000520493 XDHP47989 1333 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 CCDC194A0A1B0GVG4 234 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 LCHNA4D1U4 455 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 HOXA3O43365 443 aaPredicted RBP5.33□□□□□ -1.56
SQLE-204ENST00000520493 AKAP10O43572 662 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 PRC1O43663 620 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 GYPEP15421 78 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 RAB27AP51159 221 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 RABGGTBP53611 331 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 ERVK-21P61565 698 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 IGFL4Q6B9Z1 124 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 NXNQ6DKJ4 435 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 HTR3DQ70Z44 454 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 FAM83AQ86UY5 434 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 ZBTB46Q86UZ6 589 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 CLIP3Q96DZ5 547 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 AHCYL2Q96HN2 611 aaKnown RBP5.33□□□□□ -1.56
SQLE-204ENST00000520493 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 PDCD2LQ9BRP1 358 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 MS4A5Q9H3V2 200 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 CLCA2Q9UQC9 943 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 RIPOR2Q9Y4F9 1068 aa5.33□□□□□ -1.56
SQLE-204ENST00000520493 A0A1W2PR48 441 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 SHTN1A0MZ66 631 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 KLRG2A4D1S0 409 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 CFBP00751 764 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 LTA4HP09960 611 aaKnown RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 CLEC2LP0C7M8 214 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 HK1P19367 917 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 CASRP41180 1078 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 GZMKP49863 264 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 INHBCP55103 352 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 TBX4P57082 545 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 KRTAP10-9P60411 292 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 KLF1Q13351 362 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 TOB2Q14106 344 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 FAM214AQ32MH5 1076 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 RABL3Q5HYI8 236 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 NAIF1Q69YI7 327 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 TCEAL8Q8IYN2 117 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 CHPFQ8IZ52 775 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 SLC25A43Q8WUT9 341 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 ACAP3Q96P50 834 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 FDXACB1Q9BRP7 624 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 CCDC8Q9H0W5 538 aaPredicted RBP5.32□□□□□ -1.56
SQLE-204ENST00000520493 SLC2A4RGQ9NR83 387 aa5.32□□□□□ -1.56
SQLE-204ENST00000520493 TNKSO95271 1327 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 WASHC2AQ641Q2 1341 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 TRIM75PA6NK02 468 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 FAM20BO75063 409 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 STC2O76061 302 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 DPTQ07507 201 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 MRPL49Q13405 166 aaKnown RBP5.31□□□□□ -1.56
SQLE-204ENST00000520493 UGT8Q16880 541 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 METTL24Q5JXM2 366 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 FNDC7Q5VTL7 733 aa5.31□□□□□ -1.56
SQLE-204ENST00000520493 DPY19L2P1Q6NXN4 242 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms